Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0683 ATGAAGTTGGGTTCCAAGCCTGATGCCTTTCAAGCTGATGGAAAGTCTATCAGGTATGCATCATCTGAATTGACTACAGATATTGTTATAAATGCTGGCGACGTCAAGTTTTACCTCCACAAGTTCCCTCTACTGTCCAAGAGCAATCGATTACAAAAGCTAGTGTCAAAAGCTAATGAAGGGGATTCTGACGAAATTTTCTTGAATGAGCTCCCTGGAGGGGCCAAGGCATTTGAATTATGTGCAAAATTCTGCTATGGGGTGACTGTTACTCTTAATGCTTACAACGTTGTGGCTACACGCTGTGCAGCTGAGTATCTTGAAATGGCTGAGGATACTGATAAGGGAAACTTAATTTTTAAAATTGAGGTATTTCTTAACTCAAGCATCTTTCGGAGCTGGAAAGATTCCATAATTGTTCTACAAACTACTAAATCTCTTCTCCCATGGTCTGAGGATCTGAAGATCATTGATAGATGTATAGATTCTATAGCTTCTAAAACTTATGTGAACCCAGCTAACATCACATGGTCCTACACATATAACCGGAAACTAACTGAGCCTGATAGAATTACTGAGCACAAGATGACGTATGAAGAAAAAGTTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGATGTTTGTCAGCTGGACATTGATCTTTACAAACGAGTAATGATTACTGTGAAGTCAAAGGGAAGAATGGATGGTCTTGTGATTGGGGAGGCGCTGAAAACGTATGCAATTAGGTGGTTGCCTGATTCTATTGAGGCATTGGTTTCTGAAGCTCATGCTCGGAGAAACAAATTTCTGGTGGAAACAATTGTCTGTCTATTGCCATCTGACAATGCCGTGTGTTGTTCTTGTAGTTTCCTTCTGAAGCTATTGAAAGTGGCCATGCTAGTAGGTGTAGATGAGTTGGCAAAAGAGGAATTAATGAAGAGCACCTGCCTTAAATTGCATGAAGCTTCCATGAAAGATCTACTGATCCCTGCAAGGCCTCCTCAGAATACCATATATGATGTTCAGTTGGTACAATGTCTTTTGAATCGATATATGAATGAAAAGGGCATCAGCTGCAATATGGAAGTTTCAGAGAAGAAAGATAAAGGAAATGATAAAGCTAGTTTTGCATATATATTATTTGTGAATATTGGCCAATTGGTGGACAACTTTCTTGCAGAAATTGCACATGATCCGAATCTCAGCCTTTCTAGTTTTGTTGACTTGTCACAAACAGTTCCAGTGTTCGCTAGATCTAATCATGATGCTCTGTACGGGGCTATTGACATATACTTGAAGGTCAGAGCTTCTGCCAGCGTCCAAGCTCTTGGTAATAAGAAATCATGTCAGCGTTTGTCGTACACAGTTAGCACGGATGAAGAGTGTGAGAAAATATTTGGTGAGAAGCGTCAATCCCTCGAGAACGAGATTTGTGATTTGAAGATCAAGGGAGAAGAATTTCCCAAGAACGGGAACCTGAACAAGAATAATAGCAAAAGCAGCAGAAGTGGAATGCAATTACTTCCTTCACGTTCAAGGAGAATCTTTGACAAGTTGTGGATCGGGGGTAGTAAAGGACAGGGAGAGAACAGGAGCTCCGAGACATCGGGAAGTTCAAATAGCCCAACATCTGTTGTCCCAGGAGACACCAAATCTGGGGATGTGCTCCGGTGGCTCGCGGCGAACTCTACTCGGCGACTCGACATAATTGCTCAGTACTGGCAGCTGGTGGCTTCTCCCAATGATCATCGTTCGGGAGATTATGGCTACTCCGAAAGTGATATGCGTAAATTTGGTGCCCATGAAGGTGCTGCCGTTTATAAAGCCATAGATGCTGCTGCTGATCGTAATGTTAGAATCAGGTTATTGTCTCACTCGGGAGTATATCCAGACTACACCGCAGAACCATCTAAACTTGCTTCAGGAAGACCAAATGTTAAGAATGTGACCTTGTTGCTGGAAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAAACGAGACGTATATATTGGGTCCGCAAACAATGACTGGAAATCTCTTACTCAGGTTAAGGAAGTTGGAATATATCTTACTGGTTGCCCAAGAATAGCTGAAAGTGTTGGAGTCTACTTCAGCAATTTATGGAAACTCGCATCTCTTAATTCCTCAGCTTACACAAAAACAATATTTGATCAACAGTGGCAAGTTGAAAGAAAGAGACTTGTTAACTGGCAGGGTTATATATCTGCCTTGATGCATCTTTTATATATTGTCAGACTTTCTGGTTTTCATATACTGTGGTGCAGGTCTCCTCTTCCTGGGTATGTAAAGACTCCCCATGTTGCAGGATATCCTGTTCTTTCTGATCCCTATGTGTTTAAAGTTTCAATTGAGACTCCTGGAAGTAACCGTTCAACAGAGCTTCCCCAACCTAGCTATCTCTCCTTTGCTCCTCCTGAGCTGTCATTTGGTAAGTATCAGGCTGATGAGCAGGCTTGGGTTGATACTATCAAATCAGTTGGAATGAACGAGACAGTTAGAATCAACACCATGGACTGGTTGGGTCAGTCACAATTTACTGACCAAACTGTTTACTGGTCATCCCTGTCATCTGCGATATCAGAGGTTGTGTTTTCCAAGTATGCAACAGTAAAAATATTGGTGGCATATTGGAGTCACTTCATCAATAGCACAGATGTGTACTTGAAGTCTCTCCTCTTCTCCAACAATCTTTGCTCATCTTCAAAGTACAATGAGTGCTCTGGAAAAGTTGAGATCAAGTACTATGTGGTTCCAGGTTTCAATTCGACAGGGCCTGCCATTAAGGACGGAGCCAGTACAGGAAATTCATATCCCGGTTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTACGAGCTCACATTGGAACTAGCAATCTCGTATGGGATTACTTTTATACCACATCAGGAGTCAGCTTTGGAGCACACAACCCTGCCATTGTTTCACAACTTCAGCAGATTTTTGATGCTGACTGGCATTCACCTTACTGTGTCCCTGTTGAAAAACTGGAACAACGCCTTTCTTCTTCATTCTAG 3084 0.4206 MKLGSKPDAFQADGKSIRYASSELTTDIVINAGDVKFYLHKFPLLSKSNRLQKLVSKANEGDSDEIFLNELPGGAKAFELCAKFCYGVTVTLNAYNVVATRCAAEYLEMAEDTDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIDRCIDSIASKTYVNPANITWSYTYNRKLTEPDRITEHKMTYEEKVESVPKDWWVEDVCQLDIDLYKRVMITVKSKGRMDGLVIGEALKTYAIRWLPDSIEALVSEAHARRNKFLVETIVCLLPSDNAVCCSCSFLLKLLKVAMLVGVDELAKEELMKSTCLKLHEASMKDLLIPARPPQNTIYDVQLVQCLLNRYMNEKGISCNMEVSEKKDKGNDKASFAYILFVNIGQLVDNFLAEIAHDPNLSLSSFVDLSQTVPVFARSNHDALYGAIDIYLKVRASASVQALGNKKSCQRLSYTVSTDEECEKIFGEKRQSLENEICDLKIKGEEFPKNGNLNKNNSKSSRSGMQLLPSRSRRIFDKLWIGGSKGQGENRSSETSGSSNSPTSVVPGDTKSGDVLRWLAANSTRRLDIIAQYWQLVASPNDHRSGDYGYSESDMRKFGAHEGAAVYKAIDAAADRNVRIRLLSHSGVYPDYTAEPSKLASGRPNVKNVTLLLEDWWGSGIVHAKVWISDKRDVYIGSANNDWKSLTQVKEVGIYLTGCPRIAESVGVYFSNLWKLASLNSSAYTKTIFDQQWQVERKRLVNWQGYISALMHLLYIVRLSGFHILWCRSPLPGYVKTPHVAGYPVLSDPYVFKVSIETPGSNRSTELPQPSYLSFAPPELSFGKYQADEQAWVDTIKSVGMNETVRINTMDWLGQSQFTDQTVYWSSLSSAISEVVFSKYATVKILVAYWSHFINSTDVYLKSLLFSNNLCSSSKYNECSGKVEIKYYVVPGFNSTGPAIKDGASTGNSYPGFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTSGVSFGAHNPAIVSQLQQIFDADWHSPYCVPVEKLEQRLSSSF 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0683 1027 SUPERFAMILY POZ domain 20 111 IPR011333 -
Lele01g0683 1027 Gene3D Endonuclease Chain A 817 1010 - -
Lele01g0683 1027 SMART pld_4 659 686 IPR001736 GO:0003824
Lele01g0683 1027 SMART pld_4 954 980 IPR001736 GO:0003824
Lele01g0683 1027 Pfam BTB/POZ domain 22 113 IPR000210 GO:0005515
Lele01g0683 1027 PANTHER OS12G0117600 PROTEIN 22 458 IPR043454 -
Lele01g0683 1027 SUPERFAMILY Phospholipase D/nuclease 553 717 - -
Lele01g0683 1027 MobiDBLite consensus disorder prediction 527 549 - -
Lele01g0683 1027 MobiDBLite consensus disorder prediction 523 550 - -
Lele01g0683 1027 Pfam PLD-like domain 604 715 IPR025202 -
Lele01g0683 1027 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 659 686 IPR001736 GO:0003824
Lele01g0683 1027 Gene3D Endonuclease Chain A 547 719 - -
Lele01g0683 1027 SUPERFAMILY Phospholipase D/nuclease 843 1022 - -
Lele01g0683 1027 ProSiteProfiles BTB domain profile. 26 94 IPR000210 GO:0005515
Lele01g0683 1027 ProSiteProfiles NPH3 domain profile. 208 487 IPR027356 -
Lele01g0683 1027 CDD PLDc_vPLD3_4_5_like_2 813 1009 - -
Lele01g0683 1027 Pfam NPH3 family 208 441 IPR027356 -
Lele01g0683 1027 Gene3D Potassium Channel Kv1.1; Chain A 14 116 IPR011333 -
Lele01g0683 1027 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 954 980 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0683 Lele-ChrLele01 4016009 4024576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0683 19 454 EF-hand Containing Proteins AT3G44820 30.835 1.64e-60 217
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0683 01 4016009 4024576 Lele25g0674 25 4256202 4258206 CCT
Lele01g0683 01 4016009 4024576 Lele26g0682 26 4349839 4351835 CCT
Lele01g0683 01 4016009 4024576 Lele27g1415 27 20425467 20427467 CCT
Lele01g0683 01 4016009 4024576 Lele28g0666 28 4258456 4263795 CCT
Lele01g0683 01 4016009 4024576 Lele01g0683 01 4016009 4024576 ECH
Lele01g0683 01 4016009 4024576 Lele03g0678 03 4023655 4027156 hybridization
Lele01g0683 01 4016009 4024576 Lele04g0685 04 4167101 4170369 hybridization