Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0680 ATGGAGGAGGAGAAAAATACAATGTTTGGCAAGTATGAAATAGGAAGGCTTCTGGGGAAAGGGACTTTCGCCAAGGTGTATCACGGCAAACAGATAGCGACCGGCGAGAGCGTGGCCATCAAGATCATCAGCAAGGAGCAGGTGAGGAAGGAGGGCATGATGGAGCAGATCAAGCGCGAGATTTCCGTTATGCCATTGGTTCGTCACCCCAACGTGGTTAAGCTCAAGGAAGTGATGGCCACCAAGACCAAAATTTTCTTCGTCATGGAGTATGTCCGCGGCGGCGAGCTCTTCGCCGAGGTCGCCAGAGGCAAACTCAAGGAAGATGTCGCTCGCAAGTACTTCCAACAGTTAATCAGCGCCGTCGATTTCTGTCACAGCAGAGGAGTATCGCACCGGGATCTCAAGCCCGAAAATTTATTGCTGGACGAGAACGAGAATCTCAAAATCTCGGACTTTGGCCTCTCGGCGTTGCCGGAACAGCTCCGTCAAGACGGTCTCCTCCACACCCAGTGTGGTACTCCGGCATATGTCGCCCCCGAAGTGTTGAGAAAGAAAGGCTATGATGGGTCCAAGGCTGATATATGGTCGTGTGGTGTCATTCTGTATGCGTTGCTCGCCGGTTTTCTTCCATTCCAGAACGAGAACCTCATCAGCATGTATAGCAAGGTTTTAAGAGCAGAATTCCAATATCCTCCTTGGTTTTCTGCGGAATCGAGGCGATTGATTTCGAAAATCCTCGTGGCTGACCCGGAAAGACGGGCTGCGATCCCCGCAATAATGCGGGTCCCATGGTTTCTGAAAGGTTTATCGAGGCCGTTCGCTTTTCAACTAGAGGAACCCGTTTCGGAGAAAGCCGATGATGATAAGCAGGTGCAGCAAGCAGAACTCGCGAACCCAAAATTGAAACCTTCATCGCCCAAGTTTTTCAACGCGTTCGAATTCATTTCGTCCATGTCTTCTGGGTTTGATTTGTCCGGGCTGTTCGAGAGCAAGAGGAAAACAAGGTCGATGTTCACATCCAAATGCTCGGCCACGGCGATCGTATCGAAGATTGAGACGGTGGCGAAAGGGCTGAGTTACAAGGTAAGGAATGAGAAGGGATTCAAGATCAGGCTACAAGGGCCGTCAGAGGGAAGGAAAGGGAAGCTGAGCGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTCGCCGTAGTGGAGTTTTCAAAGAGCTCCGGCGATACCATGGAATATGCAAAGTTTTGCGAGGAAGACGTAAGGCCGGCGCTGAAAGACATAGTATGGACGTGGCAAGGTGACAGCCTGTGCGAGGGTAACATGGGAGTAGGCTACGGAGAAGAATGTCGGGAACAAGCAGTATAG 1365 0.5158 MEEEKNTMFGKYEIGRLLGKGTFAKVYHGKQIATGESVAIKIISKEQVRKEGMMEQIKREISVMPLVRHPNVVKLKEVMATKTKIFFVMEYVRGGELFAEVARGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLISMYSKVLRAEFQYPPWFSAESRRLISKILVADPERRAAIPAIMRVPWFLKGLSRPFAFQLEEPVSEKADDDKQVQQAELANPKLKPSSPKFFNAFEFISSMSSGFDLSGLFESKRKTRSMFTSKCSATAIVSKIETVAKGLSYKVRNEKGFKIRLQGPSEGRKGKLSVTAEVFEVAPEVAVVEFSKSSGDTMEYAKFCEEDVRPALKDIVWTWQGDSLCEGNMGVGYGEECREQAV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0680 454 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0680 454 Gene3D Transferase(Phosphotransferase) domain 1 3 311 - -
Lele01g0680 454 SUPERFAMILY Protein kinase-like (PK-like) 9 294 IPR011009 -
Lele01g0680 454 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele01g0680 454 CDD CIPK_C 311 425 - -
Lele01g0680 454 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0680 454 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0680 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lele01g0680 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 425 - -
Lele01g0680 454 FunFam Non-specific serine/threonine protein kinase 305 429 - -
Lele01g0680 454 ProSiteProfiles NAF domain profile. 305 330 IPR018451 GO:0007165
Lele01g0680 454 Pfam NAF domain 307 364 IPR004041 GO:0007165
Lele01g0680 454 Gene3D Kinase associated domain 1, KA1 312 430 - -
Lele01g0680 454 CDD STKc_SnRK3 11 265 - -
Lele01g0680 454 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele01g0680 454 FunFam Non-specific serine/threonine protein kinase 5 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0680 Lele-ChrLele01 4003654 4005018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0680 1 435 CBL-interacting serine-threonine protein kinases AT5G10930 69.794 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele01g0680 Pkinase 1.3e-73 CL0016