Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0662 ATGGTCATCTTGTTACGTGCTTTACAGACCGAGAAGGCTTTCTTGAAGCAACCTAAAGTGTTCCTCTGTTCGAAGAAATCCGGAAAGGGTAAGAGGCCCGGAAAAGGAGGGAACAGATTCTGGAAAAGCATTGGGTTGGGTTTCAAGACCCCAAGAGAAGCTATTGAAGGGACGTACATTGATAAAAAATGCCCATTCACTGGTACTGTGTCCATCCGGGGCCGCATTCTTGCGGGTACCTGCCATAGTGCCAAGATGACAAGGACAATCATTGTTCGCCGCAACTACCTTCATTTTGTGAAAAAATACCAAAGGTATGAAAAAAGACACTCAAACATTGCAGCACATATATCACCATGTTTCCGTGTGAAGGAGGGAGACCATGTTATCATTGGGCAATGCAGGCCTCTTTCAAAGACTGTAAGGTTTAATGTGCTGAAAGTGATTCCAGCTGGGTCTTCTGGAGGTGTGAAGAAGGCCTTTACTGGAGCGTAA 495 0.4545 MVILLRALQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0662 164 Pfam Ribosomal protein S17 79 147 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 Pfam Ribosomal_S17 N-terminal 9 77 IPR032440 -
Lele01g0662 164 ProSitePatterns Ribosomal protein S17 signature. 126 138 IPR019979 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 TIGRFAM uS17_arch: ribosomal protein uS17 59 148 IPR028333 -
Lele01g0662 164 PRINTS Ribosomal protein S17 family signature 93 116 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 PRINTS Ribosomal protein S17 family signature 136 143 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 PRINTS Ribosomal protein S17 family signature 126 136 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 SUPERFAMILY Nucleic acid-binding proteins 73 152 IPR012340 -
Lele01g0662 164 Gene3D - 3 163 - -
Lele01g0662 164 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 15 154 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele01g0662 164 FunFam 40S ribosomal protein S11 6 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0662 Lele-ChrLele01 3862846 3864328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0662 7 163 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 91.083 8.48e-95 270