Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0646 ATGTTTGCCGAAGAGAGTGGTCTTAAGGGAGACCCAAGGCTGCAAGCCATATCTCAAGCCATTCGGGTGGTGCCTCACTTCCCCAAACAAGGTATAATGTTTCAAGACATTACGACATTGTTGTTGGATCACAAGGCCTTCAAAGACACGATCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCTGTTGTTGCCGGAGTGGAATCAAGAGGATTCATGTTTGGTCCACCGATTGCCCTGGGCATTGGCGCAAAGTTTGTTCCTTTACGCAAACCTCGAAAACTTCCCGGTGAAGTGATAGCAGAGAAATACGAGCTAGAATATGGAACTGATTGTTTGGAGTTGCATGTTGGGGCTGTTCAGCCTGGTGAACGGGCCTTGATTATTGATGACATTGTGGCCACCGGTGGAACTCTGTCGGCAGCAATAAGACTTCTGGAACGTGTTGGCGCTGAAGTGATTGAGTGTGCTTGTGTCATTGGTGTGGCCGAGGTTAAGGGACATTGCAGGCTTAATGGGAAGCCATTATACGTGCTAGTGGAGCCACGTGAAGTAGATAGTACTCTGAGATGTGATTGCAGTTCTGTGTCAGCTGACGTAAAAAAGGAAGAGTGTTTGAGGAGAAAGGTGATGATGATGTGCTCCTCATACCAGTTCTCACCTGAATGGGCTCCCAAATGA 687 0.4731 MFAEESGLKGDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTIDIFVDRYRDMHISVVAGVESRGFMFGPPIALGIGAKFVPLRKPRKLPGEVIAEKYELEYGTDCLELHVGAVQPGERALIIDDIVATGGTLSAAIRLLERVGAEVIECACVIGVAEVKGHCRLNGKPLYVLVEPREVDSTLRCDCSSVSADVKKEECLRRKVMMMCSSYQFSPEWAPK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0646 228 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 10 185 - -
Lele01g0646 228 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele01g0646 228 SUPERFAMILY PRTase-like 20 177 IPR029057 -
Lele01g0646 228 Pfam Phosphoribosyl transferase domain 43 163 IPR000836 -
Lele01g0646 228 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Lele01g0646 228 CDD PRTases_typeI 51 183 IPR000836 -
Lele01g0646 228 Gene3D - 5 184 IPR029057 -
Lele01g0646 228 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0646 Lele-ChrLele01 3779193 3780892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0646 11 183 PRT Gene Family AT1G27450 71.098 1.31e-90 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0636 25 4022479 4024643 Lele01g0646 01 3779193 3780892 CCT
Lele26g0652 26 4138990 4143844 Lele01g0646 01 3779193 3780892 CCT
Lele27g1448 27 20663755 20667705 Lele01g0646 01 3779193 3780892 CCT
Lele01g0646 01 3779193 3780892 Lele01g0646 01 3779193 3780892 ECH
Lele01g0646 01 3779193 3780892 Lele02g0632 02 3783929 3785623 ECH
Lele01g0646 01 3779193 3780892 Lele03g0645 03 3787135 3788835 hybridization
Lele01g0646 01 3779193 3780892 Lele04g0652 04 3923199 3924888 hybridization