Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0641 ATGGTTTGGTCTACAAATACCAGTGACAAAGGTGTCTCTTCAACGGAAAAATTGGACACAGGAAACCTATTTTTTCTTGGGAACAATGACAACGTTGTTTGGCAGAGTTGTAGCTTCCCGACAGATACCTTGTTGCCAAATCAGGACTTCACTGAAGGAATGGAACTTATCATAGCTCCTCAGATTTACTGGTCCATACAGAGGGATAATCGCAAGACCATTGATAAAGCTGGCGGTCTTGTTGCTTCAGCATCACTGAGTGAAAATTCATGGACGTTCTATGATAAAAACAAGTCCTTGTTATGGCAATTCATTTTTTCTGGAGATTCTTCAGAGATGAATACCACTTGGGTTGCTGTTCTGGGAAATAAAGGTAACAACAATTGTCGCTGTCCTTCTGCTCTTAGCTCTCGTTCGGATTGCAAACCTAGGAATATTGTCTCTTCTTGTAATAACTCTAGATGTTCTGTAGAGCTCGTGAAAGCTGATCATGGAATCCATTACTTTGCGCTTGATTTTCTTCCACCCTCTTCAAGAACTGATTTGAATGGCTGCAAAGATTATTGCCTTGCTATCTACAAAGATGTTGAAAGAGCAACAAGTAATTTCTCAGCGAAGCTGGGACAAGGGGATTTTGGTTCAGTTTTTAAAGGGGTTTTATCAGATGGGACTCATATAGCTTTGAAGAAATTGGAAGCCATTGGACAAGGAAAGAAAGAGTTCAGGGCAGAAGTTAGCATCATTGGGAGCATTCATCATCATCATTTGGTGAAGCTTAAAGGGTTTTGTGCAGAAAAATCTCATAAGCTTCTTGCTTATGAATATATGCCAAATGGTTCATTGGACCAATGGCTATTCAAGAAAAACGAAGGAGATCAGTTCATGTTGGATTGGAATACGAGGAACCAGGGGTATCTGGCATCAGAATGGATCACAAACACTGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGGATGATGTTGCTGGAGATCATTGGAGGGATGAAGAATTACGATCCTCATGAAACTTCAGAGAAATTTCATTTCCCATCTCTTGCTTTTAAGATGATGGAACAAGGGAAGCTGAGAGATATTGCTGATTCAAAGTTGCAAATTGATGAAAACGATGAAAGATTTCGTAATTCTGTTAAGGTTTCATTTTGGTACTTACAGGATGAAATGTCTCGGAGGCCTTACATGTCCCAAGTTGTTAAAATGCTTGAGGGTCTCTGCCTTGTTTCTGAGCCTCCAACATGTTCCCATGTGAAAGCAATTGGACTAATATCTGTAAAATACTATGAGAATATTAATATTAACTCGTACAAACACAAGCAAAGTGTCTGA 1347 0.3935 MVWSTNTSDKGVSSTEKLDTGNLFFLGNNDNVVWQSCSFPTDTLLPNQDFTEGMELIIAPQIYWSIQRDNRKTIDKAGGLVASASLSENSWTFYDKNKSLLWQFIFSGDSSEMNTTWVAVLGNKGNNNCRCPSALSSRSDCKPRNIVSSCNNSRCSVELVKADHGIHYFALDFLPPSSRTDLNGCKDYCLAIYKDVERATSNFSAKLGQGDFGSVFKGVLSDGTHIALKKLEAIGQGKKEFRAEVSIIGSIHHHHLVKLKGFCAEKSHKLLAYEYMPNGSLDQWLFKKNEGDQFMLDWNTRNQGYLASEWITNTAISEKSDVYSYGMMLLEIIGGMKNYDPHETSEKFHFPSLAFKMMEQGKLRDIADSKLQIDENDERFRNSVKVSFWYLQDEMSRRPYMSQVVKMLEGLCLVSEPPTCSHVKAIGLISVKYYENININSYKHKQSV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0641 448 Gene3D Transferase(Phosphotransferase) domain 1 286 412 - -
Lele01g0641 448 ProSiteProfiles Protein kinase domain profile. 201 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0641 448 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 65 IPR036426 -
Lele01g0641 448 FunFam serine/threonine-protein kinase PBS1-like 183 275 - -
Lele01g0641 448 SUPERFAMILY Protein kinase-like (PK-like) 187 409 IPR011009 -
Lele01g0641 448 Pfam Protein tyrosine and serine/threonine kinase 304 348 IPR001245 GO:0004672|GO:0006468
Lele01g0641 448 Pfam Protein tyrosine and serine/threonine kinase 203 290 IPR001245 GO:0004672|GO:0006468
Lele01g0641 448 Gene3D Phosphorylase Kinase; domain 1 181 275 - -
Lele01g0641 448 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 190 - -
Lele01g0641 448 ProSitePatterns Protein kinases ATP-binding region signature. 207 229 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0641 Lele-ChrLele01 3752613 3754667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0641 193 418 Receptor kinase-like Gene Family AT5G03140 29.392 9.64e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele01g0641 PK_Tyr_Ser-Thr 5.8e-06 CL0016