Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0613 ATGCTGGGGGATGCGAGCTCGTGGTCTAGGGCGCTGGTGAATATCTCTCCTTATACGTTCGCCGCCGTTGGAATCGCCATCTCTATCGGCGTCTCTGTCCTCGGTGCCGCCTGGGGGATTTATATTACTGGAAGTAGCTTGATCGGTGCCGCAATTAAGGCTCCCCGAATCACCTCCAAGAACCTTATAAGCGTGATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATTGTGGCTATCATTCTGCAAACCAAATTAGAGAGTGTTCCAAAGGCGAGTATTTATGCACCTGAGTCTCTTAGAGCTGGATATGCAATTTTTGCCTCTGGAATAATTGTAGGCTTTGCAAATCTTGTTTGCGGGTTATGTGTTGGAATAATTGGAAGTAGCTGTGCATTGTCTGACGCTCAGAACTCCTCACTTTTTGTGAAAATTCTTGTGATTGAGATCTTTGGTAGTGCCCTTGGGCTATTTGGAGTCATTGTGGGAATTATCATGTCAGCTCAAGCAACATGGCCTACGACAGCTTAG 531 0.4614 MLGDASSWSRALVNISPYTFAAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKASIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTTA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0613 176 CDD ATP-synt_Vo_c_ATP6F_rpt2 102 166 - -
Lele01g0613 176 Pfam ATP synthase subunit C 24 82 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele01g0613 176 Pfam ATP synthase subunit C 107 166 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele01g0613 176 FunFam V-type proton ATPase proteolipid subunit 18 173 - -
Lele01g0613 176 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 170 - -
Lele01g0613 176 Gene3D - 18 173 IPR035921 -
Lele01g0613 176 SUPERFAMILY F1F0 ATP synthase subunit C 16 85 IPR035921 -
Lele01g0613 176 SUPERFAMILY F1F0 ATP synthase subunit C 99 167 IPR035921 -
Lele01g0613 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 62 86 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele01g0613 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 36 60 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele01g0613 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 118 144 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele01g0613 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 145 168 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele01g0613 176 CDD ATP-synt_Vo_c_ATP6F_rpt1 20 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0613 Lele-ChrLele01 3606674 3608440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0613 4 174 Primary Pumps ATPases(2) AT2G25610 91.813 7.72e-107 303