Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0612 ATGGAGAGTAGCGATGATGCGTTCTCCACGTCTGAACGTGAAGATGACGAGGAAGCTCTGAAATGGGAAGCAATAGAGAGACTCCCTACGTATTCGCGCATGAGGAGGAGCATACTTGTTGATGCAGAAGGCAAAGCAAGTGAGGTAGATATCAAGAAATTGAATTCAACAGAAAGAAAGATTCTCTTAGAGAGACTCGTGAAGATAGCAGCAGAAGATAACGAGAAGTTCTTGTTGAAACTCAAGGAACGGATTAATCGAGTTGGGCTTGATATTCCAACAGTTGAAGTTAGATTTGAGCATATATATGTGGAGGCACAAGTATACGTTGGAAGCAGAGCATTGCCTTCATTACTTAACTTCTTTGGTAATGTATTAGAGGGGTTCTTAAATTATATTCACGTTATGCCAAGTCCCAAGAAACCATTACATATTCTTCAGAATGTTGGTGGAATCATAAAGCCCAGAAGAATGGTGTTGCTTTTAGGGCCCCCAGGTTCTGGAAAGACCACTTTGCTGTTGGCTTTGGCTGGAAAACTGGGTAACGATTTAAAACATTCTGGGAAAGTGACATACAATGGGTACGGACTTGAAGAGTTTGTACCGCAGAGGACATCAGCTTATATAAATCAGAATGATGTCCACATTGGAGAAATGACTGTGAGAGAAACACTGGCCTTCTCTGCAAGATGTCAAGGAGTTGGGCACAATTATGAGATGTTGGAAGAACTGCTAAGAAGAGAAAAGGAAGAAGAGATTAGACCAGATCCTGATATTGATGCATACATGAAAGCAGCAGCACTAGAAGGACAAGAGACAAGCATGGTCACTGACTACATTCTAAAGATTTTGGGACTAGAAGTGTGTGCTGACATTATGGTAGGAGATGAAATGATAAGAGGTATATCAGGGGGACAGAAAAAGCGTGTCACAACAGGGGAGATGCTCGTTGGGCCTGTGAAAGTGTTGCTCATGGATGAAATATCATCTGGTTTGGACAGTTCAACAACTTTTCAAATAATAAATTCAATCCGACAATCCATCCATATTCTCAATGGAACTGCACTTGTCTCTCTCCTGCAACCTGCACCAGAAACTTATGAGCTATTTGATGATATCATACTTCTCACAGATGGCCAAACTGTGTACCAAGGTCCCAAAGAAAATGTGCTTGAGTTCTTTGAATCCATGGGCTTCAAGTGTCCTGATAGAAAAGGAGTTGCTGACTTCCTACAAGAAGTGACATCAAGAAAAGATCAATGGCAGTACTGGGCATGTGAAGATGAACCTTACAGTTTTGTTACTGTGAAGAACTTTGTTGAAGCCTTCCAATCATTTCATATAGGGCAAAAACTTGGAGACGAATTAGCCAATCCTTTTGACAAATCTAAATGTCATCCAGCTGCCTTGACCACTAAGAAATATGGTGTTAGCAAGAAAGAGCTGTTGAGAGCTTGTTTTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCCTTTGTCTACATATTCAAAGCAACCCAACTTACTTATTTAGCTGTCATGACTGCAACACTGTTTCTACGAACAAACATGCATCGGGATAACGTGGCGGATGGAGGAACTTACATGGGTGCTCTGTTCTTTGCTGTCATTGTAGCTATGTTCAATGGAATATCAGAGTTAAACATGACCATCATGAAACTTCCCATCTTTTACAAGCAAAGAGACTCTATATTTTATCCTTCATGGGCCTACTCTCTACCACCATGGATACTCAAAATACCAATAACCCTTGTCGAAGTAGCTATTTGGGAAGGCATCACTTATTATGGTATCGGTTTTGATCCAAATATTGGAAGGCTCTTCAAACAATACTTCCTTATTTTGTGCATTAATCAGATGGCATCTGCGCTATTCCGGTTGATGGCAGCATTAGGAAGGGATGTTATTGTTGCAAATACTGTTGGATCATTCGCTTTACTTATAGTTATGGTTTTGGGTGGATTTGTGATTTCACGAGAGAATATACAAAAATGGCTCCTGTGGGGTTATTGGTCATCACCATTGATGTACGGACAGAATGCTATTGCTGTGAACGAATTTCTGGGGCATAGTTGGAGAAAGGTTGTTCCTAATTCCAATGAGTCATTGGGAGTTATGGTATTGAAATCTCGTGGGTTTTTCCCAGCAGCTTATTGGTATTGGATTGGAGCAGGAGCTTTGATTGGTTATATCTTTCTTTTTAATTTCCTTTTCACCTTGGCTTTGCAATATCTCAAACCATTCAGAAGGGCTCAACCAGGGCTGTCAAAAGAGAACCTGCTCGAGAGAAATTCTTCCAAAACTGGAGAGTTCATTGACCATCCACTAGCAGAATTGAGTGCTTTTGATGACAAGTCAGAAACAAAAATCGAAGAAGAAGCGGGTTTATCATCTAGACCATTTCCTGGACGTGGTAGTCATAAGGGTATGGTGCTTCCTTTTCAACCTCTATCCCTCACCTTTGATGAGATAAGATATTCTGTTGACATGCCACAGGAAATGAAAAACCAAGGTGTTGTTGAGGACCGTCTTGAACTCTTAAGGGGTGTGAGTGGTGCTTTTAGGCCCGGAGTACTAACAGCTTTAATGGGAGTAAGCGGTGCTGGCAAGACTACTCTAATGGATGTTTTGGCTGGTAGGAAAACTAGTGGTTATATCGAAGGAAGCATCACAATTTCTGGGTATCCTAAAAAGCAAGAAACTTTTGCTCGTATATCAGGGTATTGTGAACAATTCGATATTCACTCACCCTATGTTACAGTCTATGAGTCTCTATTGTTCTCTGCAAGGCTTCGGTTGTCCCCTGAAATTGATGATGCAACTAAAAAGATGTTCATAGAGGAAGTCATGGAGCTTGTGGAGCTTAACTCATTAAGGGAAGCATTAGTTGGGTTACCGGGTGAGACTGGACTTTCAACTGAACAGCGCAAGAGGCTTACGATTGCAGTTGAACTTGTAGCAAACCCATCAATAATATTCATGGATGAGCCAACCTCGGGTCTTGATGCAAGAGCAGCTGCAATTGTGATGAGAACCGTGAGGAACACCGTAGACACAGGACGAACTGTGGTTTGCACCATTCACCAGCCAAGCATTGATATATTTGATGCCTTTGATGAGTTGCTACTTCTGAAATTGGGAGGAGAGCAGATATACGCTGGTCCAATAGGCCACCATTGTTCCCAGCTGATTCAGTACTTTGAGGCAATTCAAGGAGTTCCTAAAATCAAAGATGGTTATAATCCAGCAACTTGGATGCTGGAAGTGACATCACCAGGGATAGAAGCAAGACTCAATGTTAACTTCACTAATGTGTACAGAAACTCAGAACTCCACGGGAGAAATAAACAACTGATCCAAGAGCTTAGTACACCTCGTCAAAATTCAAACGATCTCTACTTTGCAAGTCAATATTCACAGTCTTTCTTTGCACAATGCATAACTTGCCTATGGAAACAACATTTATCATATTGGCGCAACACTTCATATAGTGCAGTGAGGCTAGTATTTACAACAATTATAGCTTTGCTGTTCGGGATTATTTTTTGGGACGTTGGCTCGAACAGGAGAAGGGCGCAAGATCTTTTCAATTCTATGGGTTCAATGTATGCTGCTGTTATTTTCATTGGAGTACAAAACGGCTTCTCAGTGCAGCCCATAGTGGCCGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAACGTATTCAGCTTTGCCTTACGCTGTAGCGCAGGTTATTGTTGAGCTTCCTCACATCTTGATCCAGACTCTAATGTATGGGGTTATAGTGTATGCGATGATGGGATTTGAGTGGACATTACCCAAGTTCTTGTGGTATCTCTTCTTCATGTACTTCACATTTTCATACTTCACATTCTATGGCATGATGACAATGGCTATCTCTCCCAATCCCAACGTTGCGATGATATTCTCAAGTGCCTTCTACGCAATATGGAACCTTTTCTCAGGCTTTATCATCCCCTTATCGAGAATACCGGTGTGGTGGAAATGGTACTATTGGCTTTGCCCTGTTGCTTGGACTTTGAATGGATTGGTTAGCTCCCAATACGGAGACCAAACAGAGAAACTAGAGTCAGGCCAAACAGTCAAAGAATTCGTGAGAAGTTATTTCGGATTCAAATATGACTTTTTGGGAATTGTAGCTGTTGTGGTGGCTGGTTTCTCGGTGCTCTTCGCTCTCATTTTCGCCTTTGGCATCAAGGCATTTAACTTCCAAAAGCGATGA 4272 0.4155 MESSDDAFSTSEREDDEEALKWEAIERLPTYSRMRRSILVDAEGKASEVDIKKLNSTERKILLERLVKIAAEDNEKFLLKLKERINRVGLDIPTVEVRFEHIYVEAQVYVGSRALPSLLNFFGNVLEGFLNYIHVMPSPKKPLHILQNVGGIIKPRRMVLLLGPPGSGKTTLLLALAGKLGNDLKHSGKVTYNGYGLEEFVPQRTSAYINQNDVHIGEMTVRETLAFSARCQGVGHNYEMLEELLRREKEEEIRPDPDIDAYMKAAALEGQETSMVTDYILKILGLEVCADIMVGDEMIRGISGGQKKRVTTGEMLVGPVKVLLMDEISSGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQTVYQGPKENVLEFFESMGFKCPDRKGVADFLQEVTSRKDQWQYWACEDEPYSFVTVKNFVEAFQSFHIGQKLGDELANPFDKSKCHPAALTTKKYGVSKKELLRACFSREFLLMKRNSFVYIFKATQLTYLAVMTATLFLRTNMHRDNVADGGTYMGALFFAVIVAMFNGISELNMTIMKLPIFYKQRDSIFYPSWAYSLPPWILKIPITLVEVAIWEGITYYGIGFDPNIGRLFKQYFLILCINQMASALFRLMAALGRDVIVANTVGSFALLIVMVLGGFVISRENIQKWLLWGYWSSPLMYGQNAIAVNEFLGHSWRKVVPNSNESLGVMVLKSRGFFPAAYWYWIGAGALIGYIFLFNFLFTLALQYLKPFRRAQPGLSKENLLERNSSKTGEFIDHPLAELSAFDDKSETKIEEEAGLSSRPFPGRGSHKGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVVEDRLELLRGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGSITISGYPKKQETFARISGYCEQFDIHSPYVTVYESLLFSARLRLSPEIDDATKKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPIGHHCSQLIQYFEAIQGVPKIKDGYNPATWMLEVTSPGIEARLNVNFTNVYRNSELHGRNKQLIQELSTPRQNSNDLYFASQYSQSFFAQCITCLWKQHLSYWRNTSYSAVRLVFTTIIALLFGIIFWDVGSNRRRAQDLFNSMGSMYAAVIFIGVQNGFSVQPIVAVERTVFYRERAAGTYSALPYAVAQVIVELPHILIQTLMYGVIVYAMMGFEWTLPKFLWYLFFMYFTFSYFTFYGMMTMAISPNPNVAMIFSSAFYAIWNLFSGFIIPLSRIPVWWKWYYWLCPVAWTLNGLVSSQYGDQTEKLESGQTVKEFVRSYFGFKYDFLGIVAVVVAGFSVLFALIFAFGIKAFNFQKR 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0612 1423 CDD ABCG_PDR_domain2 823 1061 IPR034003 -
Lele01g0612 1423 Pfam ABC transporter 854 1006 IPR003439 GO:0005524
Lele01g0612 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 842 1064 IPR027417 -
Lele01g0612 1423 Gene3D - 133 432 IPR027417 -
Lele01g0612 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 826 1078 IPR003439 GO:0005524
Lele01g0612 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 130 403 IPR003439 GO:0005524
Lele01g0612 1423 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 6 1423 - -
Lele01g0612 1423 FunFam ABC transporter G family member 34 133 437 - -
Lele01g0612 1423 Pfam ABC-2 type transporter 482 694 IPR013525 GO:0016020|GO:0140359
Lele01g0612 1423 Pfam ABC-2 type transporter 1152 1365 IPR013525 GO:0016020|GO:0140359
Lele01g0612 1423 Pfam ABC transporter 146 328 IPR003439 GO:0005524
Lele01g0612 1423 Pfam Plant PDR ABC transporter associated 699 759 IPR013581 -
Lele01g0612 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Lele01g0612 1423 Pfam ABC-transporter N-terminal 70 121 IPR029481 -
Lele01g0612 1423 FunFam ABC transporter G family member 40 840 1070 - -
Lele01g0612 1423 Pfam ABC-2 type transporter 361 411 IPR043926 GO:0140359
Lele01g0612 1423 Gene3D - 840 1078 IPR027417 -
Lele01g0612 1423 SMART AAA_5 155 380 IPR003593 -
Lele01g0612 1423 SMART AAA_5 863 1055 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0612 Lele-ChrLele01 3593546 3600057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0612 851 1038 Calmodulin-binding Proteins AT2G36910 26.020 2.95e-06 50.1