Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0604 ATGAAGATCACGGAGCTATTGTTAAAGATTTTGCTTGATGGAACATCGGAGCTGTTCCTTTCTGTTGCCAGTGACCGACCTGGACGAAAGGCCCACCAGAGATTTGGATTTCCTGTTGGCTTGTTTGAGTTTCACAAGTCTGGAATTATACGTAAAGATAAGCGAGGGCAAAAAGGTCAGAGCATAAATAACACGAAAAAGCAGAAGATATTCTCAGGCGACTCGGTGAAGCAAAGGTGGGACTGGGATTTTAAGCGGTTTGACGCCATTCCCATTTCCCTCCGTCACGGAAGCGGGCCCCATCCACAACGTCGAGCAACTTACGGAACTCATATCCGAACCAAGCCAGGGTCGTCTCTCTCTCCACGGCGCTGTTCCATCTTCTCCGTCGCTGAGCCCAGCCGCAGCTCCAATCCGACGGGGATACTTAACGTTCCCTCTCCAAAATTATATCTTGAAGGTTTATACGACACTTGGGCATTGTTGATGGAGCATTCTGGGCACTTGAACGGCACTCAGTTCATTATTGACATAGCGGGGAGTAGTGAAGCTTCCACGTCTACCTCCCCACATGATAGACATTTTAATGGCGGAGGTACATCACAACATGAAGACAGACCTAGTAGTGCAAGATTACCTGCTTCTCTGCCCTCAGTTTCTGTTGTATCTAATGGTACAAATTCTAGGAATTCTTCCGTTGTAAGACGAGGGGATACCCGTCGGCACAGGAGTCCATTGAATTCAGGGTTATGGATATCTATTGAGCTAGTCCTCACAGTAAGCCAGATTATTGCATCTATTATTGTTTTGTCTCTGTCAAGGCATGAGCATCCACGCACTCCATTGTTTGCATGGATTGTTGGTTATGCATCTGGATGCGTTGCTACTATCCCCCTGCTTGGTTGGAGGTATTATCATCATAACCAGAGTAGAGAGCAAAATTCATCTCAACCACGTCAAGCTTCCCCTCGAGTTAATGTTTCTTCAAGGACTCTTCTTTCTGTTTCAAGAACTAATGGGGGAGAAGACAATCAGGCTGTTGTTTCATCCTCTAGAACCAGTCAAGTTCCAGTAATGATGAATCCAAGACTGAAGTCTCTAGCGGAATATTTCAAAATGGCCTTAGATTGCTTTTTTGCTGTATGGTTCGTTGTTGGCAATGTGTGGATCTTTGGGGGAAACTCATCTGCTAATGATGCTCCTAATATGTATAGGTTATGTATTGTGTTTCTGACATTCAGCTGTATTGGCTATGCTATGCCCTTCATTCTATGTGCAACAATCTGCTGTTGCCTGCCTTGTATAATTTCCATCCTTGGGGTTAGAGAGGATCTGACACAAACAAGAGGGGCAACCTCTGTATCTATTAATGCCCTGCCAACGTACAAGTTCAAGGTGAAGAAACGTAAAAACAGTGATGAAAGCAACTCAAATGTTTTTGACGGTGGAATTGTGGCTGCTGGAACTGAAAAGGAGCGTGTGATATCAGGAGAAGATGCAGTTTGCTGCATCTGCCTGGCAAAGTATGAAAATAACGATGAGCTGAGAGAGTTGACATGTTCTCATCTTTTTCACAAAGACTGTGTAGACAAGTGGCTGAAGATTAATGCATTATGCCCTCTTTGCAAAAGTGAGGTTGGTGGGAACCTAATAGGATCCGTCTCTGGTGAAGGTTCCAACCAACAAAGGGGTGAGAGCAGAGTAGGAGTTAGCCCAATCAATAGCATAGTATAG 1734 0.4481 MKITELLLKILLDGTSELFLSVASDRPGRKAHQRFGFPVGLFEFHKSGIIRKDKRGQKGQSINNTKKQKIFSGDSVKQRWDWDFKRFDAIPISLRHGSGPHPQRRATYGTHIRTKPGSSLSPRRCSIFSVAEPSRSSNPTGILNVPSPKLYLEGLYDTWALLMEHSGHLNGTQFIIDIAGSSEASTSTSPHDRHFNGGGTSQHEDRPSSARLPASLPSVSVVSNGTNSRNSSVVRRGDTRRHRSPLNSGLWISIELVLTVSQIIASIIVLSLSRHEHPRTPLFAWIVGYASGCVATIPLLGWRYYHHNQSREQNSSQPRQASPRVNVSSRTLLSVSRTNGGEDNQAVVSSSRTSQVPVMMNPRLKSLAEYFKMALDCFFAVWFVVGNVWIFGGNSSANDAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDLTQTRGATSVSINALPTYKFKVKKRKNSDESNSNVFDGGIVAAGTEKERVISGEDAVCCICLAKYENNDELRELTCSHLFHKDCVDKWLKINALCPLCKSEVGGNLIGSVSGEGSNQQRGESRVGVSPINSIV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0604 577 MobiDBLite consensus disorder prediction 554 577 - -
Lele01g0604 577 FunFam E3 ubiquitin-protein ligase 485 550 - -
Lele01g0604 577 Pfam Ring finger domain 502 543 IPR001841 -
Lele01g0604 577 ProSiteProfiles Zinc finger RING-type profile. 502 543 IPR001841 -
Lele01g0604 577 SMART ring_2 502 542 IPR001841 -
Lele01g0604 577 MobiDBLite consensus disorder prediction 183 233 - -
Lele01g0604 577 CDD RING-H2_RNF111_like 501 543 - -
Lele01g0604 577 SUPERFAMILY RING/U-box 494 546 - -
Lele01g0604 577 MobiDBLite consensus disorder prediction 183 244 - -
Lele01g0604 577 MobiDBLite consensus disorder prediction 95 123 - -
Lele01g0604 577 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 163 546 - -
Lele01g0604 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 548 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0604 Lele-ChrLele01 3543464 3550372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0604 235 547 C3H Transcription Factor Family AT1G80400 59.119 2.48e-138 406