Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0594 ATGCAGGAGGAGAGAGAGAGATTGCAGAGTACGGCACAACTTTCACCTTTCCCTTATTTTTACTGCATTTGGACCTTTTTTCTTCAGCATCCCATCTCTGCCAAGTTTTCAGACCACAAGGAGAGAACATCCAGGTCATTTGAGATAGTGCTGCGGAAGAGGAATAGGTCTCTCCAGAAGGATCAACATCACATGGGTCATAATTGGGACTACTATTCTGAGTCTCATGGTTTGGGGACCAAACTCAGAAACAAATTAATTTTCCATGTGCCTCGTTTGTTTGTGGGTCTTGTTCCTAACAGCTTGTTAGATTCTGATTCAATGAGGAGCCCCACATCTCCTCTTGATTTTAAAGTGCTTCCAACTCCAAAACCATGCCAGCAGAGGAGCTGGGATTGCAGCAAAGTAGGCTTAAGCATACTAGATTCTTTCAACGATTCTTCTGAATTTTCTGGGAAAATTATATCTTCATCGGAGAGCAAGATTCCAATTATCAGTCCCAGAATGAAAATTAATTTCCCAAATTGTCTAAACATTGCTAATTCTTTTGAGGCATCTAAGTCTTTACCCAAAGATTTTTGCAAACTTCCTTATACCCAGAATAGATCTGCTATTTCCAATATTCTTTTTGAGATTGGAGAAACCTGCCCAGAGCATGAGCCATTTAGGAAAAGCCTGTCTTCTTCAATGGACTCTGGTTTTTTCTCAGTGAAAGATATGCCCACCCAAGCAATCTTTCCTCATTTTATCCAAACAAACCATAACTCAAACACTTCACTGCCTACAGAATTGAACTCAAATCATTTATCTGCTGGTGATATTGAGGAATCTGAAGACTACACATGTATAATTTCCCATGGTCCCAATCCCAGAACAACTCGTATTTTTGGTGATTGCATCTTGGAAAGTCATTATAATAATCTTAGGATTCATGATAAGAATGAAGAGAAGGAAAATGGAGTGTTCCGGGTCGCAAACTGCTCACAAACTCCAAACCAGTATCCCTCTAACAATTTCTTGAGTTTTTGTTACCACTGCAACAAGAAACTGGATGAAGGAAAAGATATCTACATTTATAGAGGTGAAGAAGCATTTTGCAGTTTGATTTGCCGTGATCTGGAGATCTTGATTGATGAGCAATTGCGGAAATCCAGTGATTCTAAAGAATCTCATCAAGAGCAAGAAATTAAGGAGGAACTTTTTAAACTTAGCTAG 1215 0.3918 MQEERERLQSTAQLSPFPYFYCIWTFFLQHPISAKFSDHKERTSRSFEIVLRKRNRSLQKDQHHMGHNWDYYSESHGLGTKLRNKLIFHVPRLFVGLVPNSLLDSDSMRSPTSPLDFKVLPTPKPCQQRSWDCSKVGLSILDSFNDSSEFSGKIISSSESKIPIISPRMKINFPNCLNIANSFEASKSLPKDFCKLPYTQNRSAISNILFEIGETCPEHEPFRKSLSSSMDSGFFSVKDMPTQAIFPHFIQTNHNSNTSLPTELNSNHLSAGDIEESEDYTCIISHGPNPRTTRIFGDCILESHYNNLRIHDKNEEKENGVFRVANCSQTPNQYPSNNFLSFCYHCNKKLDEGKDIYIYRGEEAFCSLICRDLEILIDEQLRKSSDSKESHQEQEIKEELFKLS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0594 404 MobiDBLite consensus disorder prediction 384 404 - -
Lele01g0594 404 PANTHER FCS-LIKE ZINC FINGER 11 52 402 IPR044585 -
Lele01g0594 404 Pfam zinc-finger of the FCS-type, C2-C2 332 380 IPR007650 -
Lele01g0594 404 ProSiteProfiles Zinc finger FLZ-type profile. 338 382 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0594 Lele-ChrLele01 3500684 3502659 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0577 28 3696571 3699316 Lele01g0594 01 3500684 3502659 CCT
Lele25g0573 25 3644981 3646486 Lele01g0594 01 3500684 3502659 CCT
Lele26g0587 26 3765049 3766549 Lele01g0594 01 3500684 3502659 CCT
Lele01g0594 01 3500684 3502659 Lele25g0556 25 3537496 3537810 CCT
Lele01g0594 01 3500684 3502659 Lele26g0571 26 3638797 3639307 CCT
Lele01g0594 01 3500684 3502659 Lele27g1522 27 21149721 21150035 CCT
Lele01g0594 01 3500684 3502659 Lele28g0560 28 3574131 3574663 CCT
Lele01g0594 01 3500684 3502659 Lele01g0594 01 3500684 3502659 ECH
Lele01g0594 01 3500684 3502659 Lele03g0598 03 3523577 3524757 hybridization
Lele01g0594 01 3500684 3502659 Lele04g0602 04 3643851 3645039 hybridization