Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g0580 | ATGCCGGGTTTGACATGTAATGCTTGCAACAAGGAGTTCAGCGACGATGCTGAGCAAAAGATTCATTACAAATCCGAGTGGCACAGATACAATCTCAAGCGCAAGGTGGCCGGTGTTCCTGGGGTGACAGAAGCACTGTTCTTGGCTAGACAGTCTGCAGCTGCTCAAGAGAAAGATAAAAATGAAACTCCCATGCTCTATAGTTGTGGCCTTTGTGGAAAAAGTTATAAAAGTTCAAAGGCTCATGCTGAGCATCTCAAATCCCGGGGTCATTTGATGCGGGCATCTGAAGGAAGTAGTCCTTCATATGACAAGGCAATAGTCAAACCGCGAGCACAACGTGTAGTGAACAGACCTCCTCCCAGAAGAGATGTGGACAGTGATGAAAGTGAAGGAAGTGAAGATGAATGGGAGGAGGTCGATCCTGAGGATCCTTTGATTAATTATGCTTCAACGTCCCTGACTGGTTTGAATGTGAATGAGCATGATAAGAATGTTGATATGGACGAAGATGATGATGATTATGGGGATTTGGATCCATCATGCTGTTTTATGTGTGATCAAAAGCATGATACTATAGAAAGTTGCATTGTTCACCTACACAAGCAGCATGGATTCTTCATTCCTGATGTTGAGTATTTAAAGGATCCACAAGGCCTGCTCACCTATCTAGGCCTTAAGGTCACGAGGGATTATATGTGTCTTTACTGCAATGATAGATGCCATCCTTTCAGCAGCCTGGAAGCAATTAGGAAACACATGGCAGCCAAAAGTCACTGTAAAGTGCATTATGGTGATGGCGATGACGATGAGGAAGTGGAGTTGGAAGAATTCTATGATTATAGCAGCAGTTATGTGGATGAGCAAGGGAAGCAACTAGTTGCATCAGGTGACGGAGACAACAATATAGAACTTGGCAGTGGTGGATCGGAGCTCATAATCACCAAGAAATCAAATGATGGAATATCAACCAGAACACTTGGTTCACGTGAATTTTTGCGTTATTATCGTCAAAAACCCCGACCATCACCCACAAATAACATGGCTGTTGCTGCTGCATTGGCTTCAAGGTACAGGAGCATGGGTTTGGCGACAGTGCAATCAAGGGAGCAAATGGTGAGGATGAAAGTGCTGAAGGAAATTAATAGGACTGGCGTGGAAGCCTTGCGTTCTAAAATAGGGATGAAAAGTAATGTCATCCGGAACTTGCCAAAGAATTGCCCATATTAG | 1230 | 0.4398 | MPGLTCNACNKEFSDDAEQKIHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAAAQEKDKNETPMLYSCGLCGKSYKSSKAHAEHLKSRGHLMRASEGSSPSYDKAIVKPRAQRVVNRPPPRRDVDSDESEGSEDEWEEVDPEDPLINYASTSLTGLNVNEHDKNVDMDEDDDDYGDLDPSCCFMCDQKHDTIESCIVHLHKQHGFFIPDVEYLKDPQGLLTYLGLKVTRDYMCLYCNDRCHPFSSLEAIRKHMAAKSHCKVHYGDGDDDEEVELEEFYDYSSSYVDEQGKQLVASGDGDNNIELGSGGSELIITKKSNDGISTRTLGSREFLRYYRQKPRPSPTNNMAVAAALASRYRSMGLATVQSREQMVRMKVLKEINRTGVEALRSKIGMKSNVIRNLPKNCPY | 409 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g0580 | 409 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 69 | 91 | IPR013087 | - | |
Lele01g0580 | 409 | Gene3D | Classic Zinc Finger | 4 | 89 | - | - | |
Lele01g0580 | 409 | SUPERFAMILY | beta-beta-alpha zinc fingers | 66 | 97 | IPR036236 | - | |
Lele01g0580 | 409 | SUPERFAMILY | beta-beta-alpha zinc fingers | 169 | 228 | IPR036236 | - | |
Lele01g0580 | 409 | SMART | c2h2final6 | 181 | 204 | IPR013087 | - | |
Lele01g0580 | 409 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
Lele01g0580 | 409 | SMART | c2h2final6 | 232 | 259 | IPR013087 | - | |
Lele01g0580 | 409 | SMART | c2h2final6 | 67 | 91 | IPR013087 | - | |
Lele01g0580 | 409 | MobiDBLite | consensus disorder prediction | 129 | 143 | - | - | |
Lele01g0580 | 409 | Pfam | C2H2 type zinc-finger (2 copies) | 183 | 284 | IPR041661 | - | |
Lele01g0580 | 409 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676|GO:0008270 | |
Lele01g0580 | 409 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
Lele01g0580 | 409 | MobiDBLite | consensus disorder prediction | 83 | 145 | - | - | |
Lele01g0580 | 409 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 67 | 96 | IPR013087 | - | |
Lele01g0580 | 409 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 36 | IPR036236 | - | |
Lele01g0580 | 409 | PANTHER | ZINC FINGER PROTEIN 622 | 2 | 408 | IPR040025 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g0580 | Lele-ChrLele01 | 3417913 | 3420107 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele01g0580 | 1 | 409 | C2H2 Transcription Factor Family | AT4G31420 | 63.133 | 2.38e-178 | 501 |