Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0576 ATGTTAATTCGAATGTCTGGTCTATCGTCAGACGAAGGAGCCTCTCGGCTCCAGGTGTTCGGACCGAACAAATTGGAAGAGAAAAAGGTTCTGAGAGATGGTCAATGGAATGAACAAGATGCTGCAATTTTAGTCCCAGGAGATATAATCAGCATCAAGCTAGGAGATATTATCCCAGCTGATGCCCGTCTTCTGGAGGGTGATCCTTTAAGTGTTGATCAATCTGCTTTAACTGGAGAGTCTCTTCCTGTAACCAAAAGCTCTTCGGATGAAGTATTTTCTGGATCAACTGTTAAAAAGGGAGAGATTGAAGCAGTTGTGATTGCCACTGGTGTCCACACCTTCTTTGGTAAAGCTGCTCATTTGGTGGATAGCACCAACCAAGTTGGTCATTTCCAGAAAGTCCTCACAGCCATTGCTGGCACAGGGCTAGTAAAGATTTTGAACCTTTGCAACAGCAAAGACGATGTAAGGAAGAGGGTCCATTCATGTATTGATAAGTTTGCTGAGCGTGGACTTCGTTCTTTAGGTGTTGCAAGACAGCAAGTGCCAGAAAAGTCAAAAGATGCTCCAGGGGCACCATGGCAACTTGTTGGTTTGCTACCTCTGTTTGATCCTCCTAGGCATGACAGCGCCGAGACCATCAGAAGAGCTCTTCACCTTGGTGTCAATGTCAAGATGATTACCGGTGATCAGCTTGCCATTGCCAAGGAAACTGGGCGAAGGCTTGGAATGGGAACAAACATGTACCCGTCTTCTTCATTGCTTGGAGGAGACAAGGATGCTACTGTTTCAGCTCTTCCGGTTGACGAATTGATTGAGAAGGCTGATGGATTTGCAGGAGTCTTTCCTGAGCACAAATATGAAATAGTGAGAAGACTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTGAATGATGCACCTGCATTGAAGAGGGCAGATATTGGAATAGCTGTTGCAGATGCTACGGATGCTGCTAGGAGTGCTTCTGACATTGTCCTCACTGAACCTGGTTTGAGTGTCATTGTCAGTGCAGTGCTCACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACTATTTATGCTGTGTCCATCACTATTCGTATCGTGTTTGGTTTCTTGTTTATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTTCTGATTATTGCCATACTAAATGACGGAACCATTATGACAATATCCAAGGATCGAGTGAAGCCATCCCCACAGCCCGACAGTTGGAAACTGAAGGAGATATTTGCGACCGGCGTTGTGCTTGGTGGTTACTTGGCACTAATGACAGTTGTATTTTTCTGGGCCATATACGATACAGACTTCTTCTCGGACAAGTTTGGAGTGAGGTCTCTGAGAGACAGACCTGATGAAACGATGGCAGCCTTGTACCTGCAAGTCAGTATTATAAGCCAGGCCTTAATTTTTGTGACTAGGTCTCGGAGCTGGTCCTATATTGAAAGACCCGGTCTTCTGCTTCTCGGTGCTTTCTTAATTGCTCAGCTGATAGCAACTTTGATTGCTGTGTATGCTCACTGGGGATTCGCAAGGATTAAGGGAATGGGATGGGGATGGGCTGGTGTAATCTGGCTCTACAGTATCGTGACATATATCCCTCTTGATTTGCTCAAATTTGGTATCCGCTACGGTCTCAGTGGAAAGGCTTGGGATAATCTTTTGGAGAACAAGACTGCTTTCACTACCAAGAAAGATTATGGGAAAGAAGAGAGGGAAGCACAGTGGGCAGCTGACCAGAGAACTCTTCATGGTCTTCAGCCACCAGAAACTACAAACCTTTTCAATGATAAAAGTAGCTACAGGGAGCTTTCAGAGATTGCAGAGCAAGCCAAGCGACGAGCTGAGGTTGCAAGGCTAAGGGAGCTTCACACTCTGAAGGGACACGTTGAATCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAGCATTATACAGTGTAA 2004 0.4551 MLIRMSGLSSDEGASRLQVFGPNKLEEKKVLRDGQWNEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIAGTGLVKILNLCNSKDDVRKRVHSCIDKFAERGLRSLGVARQQVPEKSKDAPGAPWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGGDKDATVSALPVDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGGYLALMTVVFFWAIYDTDFFSDKFGVRSLRDRPDETMAALYLQVSIISQALIFVTRSRSWSYIERPGLLLLGAFLIAQLIATLIAVYAHWGFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFGIRYGLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAADQRTLHGLQPPETTNLFNDKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0576 667 FunFam Plasma membrane ATPase 26 110 - -
Lele01g0576 667 SUPERFAMILY Calcium ATPase, transduction domain A 29 123 IPR008250 -
Lele01g0576 667 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 275 394 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 FunFam Membrane H(+)-ATPase1 145 204 - -
Lele01g0576 667 FunFam Plasma membrane ATPase 197 352 - -
Lele01g0576 667 Pfam haloacid dehalogenase-like hydrolase 196 318 - -
Lele01g0576 667 Gene3D - 304 562 - -
Lele01g0576 667 SUPERFAMILY HAD-like 196 350 IPR036412 -
Lele01g0576 667 FunFam ATPase 4 plasma membrane-type 288 531 - -
Lele01g0576 667 Gene3D - 2 123 - -
Lele01g0576 667 Gene3D - 200 264 IPR023214 -
Lele01g0576 667 Gene3D - 616 667 - -
Lele01g0576 667 Pfam E1-E2 ATPase 28 142 - -
Lele01g0576 667 Gene3D - 133 199 IPR023299 GO:0000166
Lele01g0576 667 SUPERFAMILY Calcium ATPase, transmembrane domain M 6 561 IPR023298 -
Lele01g0576 667 PRINTS H+-transporting ATPase (proton pump) signature 476 497 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 PRINTS H+-transporting ATPase (proton pump) signature 304 320 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 PRINTS H+-transporting ATPase (proton pump) signature 276 292 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 PRINTS H+-transporting ATPase (proton pump) signature 161 179 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 PRINTS H+-transporting ATPase (proton pump) signature 335 360 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele01g0576 667 PANTHER CALCIUM-TRANSPORTING ATPASE 146 599 - -
Lele01g0576 667 Coils Coil 618 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0576 Lele-ChrLele01 3391760 3396648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0576 146 667 Primary Pumps ATPases AT2G24520 86.015 0.0 939