Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g0572 | ATGGATAAATATGATGGTAAAAGAGCTGTTGATAAGGATGTAGTCTCTAGAAAGGGAATGCCTAATGTATTCAGAACTGTTGCTGATACTAAGGATCGAAGTGTTCAGTTGTGCAGCCGACCTAATTGCAGTAGCAGGATTCACTCTTCTATAGTTGCTGAGAATAGTTCCTGTAGGAAAGGTAAATCCTTGAGGCCTTCAACCCAATCCTCTTTAAGTGGGAAGGAAGCAGTTGGAAGATCCTGCAGAACTTTCTCGGGAATTAGTAATCAGAGAAAGTCCCTTAAAGAGCCTCGGCAAACATTATCGTCTAGGTTAGAGACAGATTCATCGGAATCTAGCAGCAGCATGCATGATGAACCTCCATCTGCACCTTATCAAAGTCAGCTTCAAGCTGAACAAGGACACGCCGAGTCTGATAACGTGATGGTGCTGGAAGTCGCGAGCACCATAGGTGTTTCAAGAACAAGATCTCAGAGGAATTTTCATCAACCTGGATTGCATGGTCAAGAAACTAAAAGCATTGGCTCAGTGACACGTGCTGGTACCTGCCGATATAATTTGAGGAACGTCAAGTGCAACTCAATAAATGATGTTAGCTCCACAGGTTCTTCTTCTTCTTCAGATTCAACCATGAATAGAAGGAAGGATGTCGTGAAGGAAAGAAATTATGGAAGGAAAAGAAGTTCTACTTCCACTGCCAGAGGGAATAAGTTGAGTGGGTCTTTATTGGAAGGACAAAATTCTGGTTCTGGAATTGGCATATCTATTTCTGATCCAAGAAGATCAAGAAATATTCCTACTCACCGGGACAACATTGCATCGGTTAGAACTCGAAGGTCTACAAGTGGTAATGCTAGGGAAAGGCTTCCAAGCCATGGGAATGCACACCCTATTCAGCCTAATGAATCCCCTTTGCCTCATGAACTTGTTTTTCCACATCATGCTTCTGCAGAGTCTACTATAATTCGATTAAGCACCCATAGTAGACCAGGTTCGAGCGACGGGCAGTCCGCATCTCCTGCAGAATATAACGTTACTTTTCCTCTAAGAAATCGGAGTAGACTACAGCACCAAAACAGTATTGCTGAGGTATTATTAGCACTCGAGAGGATTGAACAAGATGAAGAGCTGACAGAGGAGCAGGAAATTCGTTTACTAGAGACAAATTTCCTCCTTAATGGACCATACTTATATGATCAGCATAGAGACATGCGTATGGATATTGATAATATGTCATACGAGGAACTATTAGCCCTGGAAGAAAGGATGGGTACTGTGAGCATAGCTTTAACTGAGGAAGCACTGTCAGGATGCCTTGAGAGAAGCATCTATCAGTCTACACCTTCAGATGACAACGGCGACGACGAGAGCAGCAATATTATTAATGACCACATCAAATGCAGCATCTGCCAGGATGAATATGTGGTTGGAGATGAAGTGGGGAGTCTGCAGTGTGAGCATGGATTTCATGTGGCTTGCATACAACAGTGGCTTGGCCTCAAGAACTGGTGCCCTATCTGCAAAGCATCAGCAGCACCTTCAGAGTCATCTAATCGGACCTGA | 1566 | 0.4355 | MDKYDGKRAVDKDVVSRKGMPNVFRTVADTKDRSVQLCSRPNCSSRIHSSIVAENSSCRKGKSLRPSTQSSLSGKEAVGRSCRTFSGISNQRKSLKEPRQTLSSRLETDSSESSSSMHDEPPSAPYQSQLQAEQGHAESDNVMVLEVASTIGVSRTRSQRNFHQPGLHGQETKSIGSVTRAGTCRYNLRNVKCNSINDVSSTGSSSSSDSTMNRRKDVVKERNYGRKRSSTSTARGNKLSGSLLEGQNSGSGIGISISDPRRSRNIPTHRDNIASVRTRRSTSGNARERLPSHGNAHPIQPNESPLPHELVFPHHASAESTIIRLSTHSRPGSSDGQSASPAEYNVTFPLRNRSRLQHQNSIAEVLLALERIEQDEELTEEQEIRLLETNFLLNGPYLYDQHRDMRMDIDNMSYEELLALEERMGTVSIALTEEALSGCLERSIYQSTPSDDNGDDESSNIINDHIKCSICQDEYVVGDEVGSLQCEHGFHVACIQQWLGLKNWCPICKASAAPSESSNRT | 521 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g0572 | 521 | SUPERFAMILY | RING/U-box | 467 | 513 | - | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 195 | 306 | - | - | |
Lele01g0572 | 521 | ProSiteProfiles | Zinc finger RING-type profile. | 468 | 509 | IPR001841 | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 56 | 97 | - | - | |
Lele01g0572 | 521 | SMART | ring_2 | 468 | 508 | IPR001841 | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 263 | 286 | - | - | |
Lele01g0572 | 521 | FunFam | E3 ubiquitin-protein ligase arkadia | 428 | 514 | - | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 56 | 136 | - | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 213 | 228 | - | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 104 | 136 | - | - | |
Lele01g0572 | 521 | Coils | Coil | 362 | 382 | - | - | |
Lele01g0572 | 521 | Pfam | Ring finger domain | 467 | 509 | IPR001841 | - | |
Lele01g0572 | 521 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 74 | 513 | IPR045191 | GO:0061630 | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 229 | 262 | - | - | |
Lele01g0572 | 521 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 452 | 521 | IPR013083 | - | |
Lele01g0572 | 521 | MobiDBLite | consensus disorder prediction | 195 | 212 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g0572 | Lele-ChrLele01 | 3377111 | 3379246 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele01g0572 | 362 | 512 | C3H Transcription Factor Family | AT2G15530 | 40.252 | 3.80e-30 | 123 |