Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0568 ATGGCTGTGGATCTCATGGGGTTCCCCAAAATCGACGAGCAGAAGGCAATCCAGGAGGCTGCATCGGAAGGCCTCAAGGGTATGGAGCATCTGATCCGCCTTCTCTCTCACCAACCCAATCGCATGGACTGCACTGACCTCACCGATGTCACCGTTTCCAAGTTCAAAAGGGTCATTTCCCTCCTCAACCGGACCGGTCACGCCCGGTTCAGGCGAGCACCCATTCCTCCATCTTCGTACTCTTTTGCTGTGCCGCCGCCGTCCGCCCCCTCGATTTCACAAATGCATTCATTCAGGCTATCTCCGGCGCAGTTCACCTCTCCGCCTGGCGTGTCTCCGAGTCCTGTTGTAAATCAGGCCTCTGTGCAGCACGCGCCTTCTAGTTTCGTTCCGTCTCAGGCGCCGCAGAGTTTGACTCTTGATTTTACAAAGCCTAACATCGTAAGCTCTAAGACTAAACCGTTAGAGCTCGAGTTCTCGAAGGAGACCTTTAGCGTCTCGTCTAACTCGTCGTTTATGTCGTCCGCCATTACCGGAGACGGCAGCGTTTCGAACGGAACGCAAGGATCTTCTCTCTTGTTGACTCAGGCGGCACCGACGGTTTCCGGTGGAAAACCACTTCTTTCCACGGGGCCGTTCAAGAAAAGATGTCATGCCCACCGCGACCACTCCGACGACGCCTCCGGCTCGGCCAAATGTCACTGCGTTAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCCATAAGTTCAAAGATGGCAGACATTCCGCCGGACGAGTACTCATGGAGGAAGTACGGTCAGAAACCGATCAAGGGATCACCATACCCACGAGGGTACTACAAGTGCAGCACGGTGAGAGGATGTCCGGCGAGGAAACACGTGGAGCGAGCGACTGATGATCCGACGATGCTGGTCGTGACGTACGAGGGGGAGCACCGACATGTGATTCAGGGTGTGATGCACGAGAACATGGCCGGCAAAGAGGGTTTGATGTTCGAGTCAACGTGA 1020 0.5529 MAVDLMGFPKIDEQKAIQEAASEGLKGMEHLIRLLSHQPNRMDCTDLTDVTVSKFKRVISLLNRTGHARFRRAPIPPSSYSFAVPPPSAPSISQMHSFRLSPAQFTSPPGVSPSPVVNQASVQHAPSSFVPSQAPQSLTLDFTKPNIVSSKTKPLELEFSKETFSVSSNSSFMSSAITGDGSVSNGTQGSSLLLTQAAPTVSGGKPLLSTGPFKKRCHAHRDHSDDASGSAKCHCVKRRKNRVKKTVRVPAISSKMADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLVVTYEGEHRHVIQGVMHENMAGKEGLMFEST 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0568 339 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0568 339 Gene3D WRKY domain 247 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0568 339 Pfam Plant zinc cluster domain 214 258 IPR018872 -
Lele01g0568 339 SUPERFAMILY WRKY DNA-binding domain 258 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0568 339 FunFam WRKY transcription factor 65 244 321 - -
Lele01g0568 339 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0568 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 319 IPR044810 GO:0003700
Lele01g0568 339 Pfam WRKY DNA -binding domain 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0568 Lele-ChrLele01 3361393 3362993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0568 1 338 WRKY Transcription Factor Family AT2G24570 58.000 1.22e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g0568 WRKY 9.6e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0568 01 3361393 3362993 Lele01g0568 01 3361393 3362993 ECH
Lele01g0568 01 3361393 3362993 Lele03g0574 03 3392358 3393962 hybridization
Lele01g0568 01 3361393 3362993 Lele04g0581 04 3520131 3521723 hybridization