Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0551 ATGATGGAGACCAAGCCGGCCGCCGTCTTGCCTGCCTCCGCCACCACTCAATCCCAATCTCTCCACGCGTCGTCGATTCTCTCCGGGATCTGCAACATGAAACGGACGCCGTCCGAGTTGGCCCTGGAAGAATTCCTGAATAAGACGGTTGCATCGACCAACGACGTGGACGTGAAACCGTACGAGCTTTGGGGTCAAAGAGACAAAAGTTCCCCCCACGCGGATTCATTTCTCGCCGGCGTTGGCCCCGACTATTTCGATCACGCTTTCCGAAACTCGGATGCTGTGACTGCGTTTTCAACTTGTGAGGAACTAACAGATTCCCTTGTATGGCCCCAGAACGCAACTCCCAAGCATTCACCTCTCTCTGCTACGATTGAATCTCAGTCATCCATTTGTGGTACTGCTGTTTGCAGCCCTGTGTCAGCTAATAATCAACCAACCCTTGGAGATACTCAAGCCAAAGGAACCACCACAAGTGCTTCTTCCTCTCGTGAGCAATCTGATGAGGATGACGTAGCAGGTCCTTGTGATCAGAGCGCAAACCCCATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATCGGGAATCTGCAAGGAGATCCAGAAGAAGAAAACAAGCACATCTTGCTGATATTGAGTTGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTGTACAAACAGCTTACAGATGCAAGTCAGCAATTTCGTGAGGCTAATACAAATAACCGAGTGCTAAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGGTGACTAGGGGCTCCTTCTCCACCTTAAACAATCCGCTTGTTCAGAATCAGAGTCAGCTACACGCGCCACCACAACTCAACGCCACTAGCCTGCAGCGTCGCATGGCACATGTCTCGCCGACGATCACTGTCCATGGAAGTGATGCCTCATATGCTGCTGTTGCAGTTGATGATCACAATTCATCTCTTGGTCTTGCAAACTTGGATATCAGCAACAGCAATTTCAACACTGGAGTTATTAGTGATGCTATGAGATGTATCAGTGAAATATATCGTTGA 1074 0.4907 MMETKPAAVLPASATTQSQSLHASSILSGICNMKRTPSELALEEFLNKTVASTNDVDVKPYELWGQRDKSSPHADSFLAGVGPDYFDHAFRNSDAVTAFSTCEELTDSLVWPQNATPKHSPLSATIESQSSICGTAVCSPVSANNQPTLGDTQAKGTTTSASSSREQSDEDDVAGPCDQSANPIDMKRLRRKVSNRESARRSRRRKQAHLADIELQVEQLRLENAALYKQLTDASQQFREANTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNPLVQNQSQLHAPPQLNATSLQRRMAHVSPTITVHGSDASYAAVAVDDHNSSLGLANLDISNSNFNTGVISDAMRCISEIYR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0551 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Lele01g0551 357 Gene3D - 186 242 - -
Lele01g0551 357 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Lele01g0551 357 Coils Coil 203 265 - -
Lele01g0551 357 MobiDBLite consensus disorder prediction 143 164 - -
Lele01g0551 357 FunFam BZIP transcription factor 185 236 - -
Lele01g0551 357 SUPERFAMILY Leucine zipper domain 187 237 IPR046347 GO:0003700|GO:0006355
Lele01g0551 357 MobiDBLite consensus disorder prediction 143 208 - -
Lele01g0551 357 Pfam bZIP transcription factor 186 236 IPR004827 GO:0003700|GO:0006355
Lele01g0551 357 PANTHER BASIC LEUCINE ZIPPER 63 20 339 - -
Lele01g0551 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0551 Lele-ChrLele01 3275569 3278697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0551 33 356 bZIP Transcription Factor Family AT5G24800 40.979 7.99e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele01g0551 bZIP_1 1.3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0551 01 3275569 3278697 Lele01g0551 01 3275569 3278697 ECH
Lele01g0551 01 3275569 3278697 Lele03g0556 03 3297399 3300535 hybridization
Lele01g0551 01 3275569 3278697 Lele04g0564 04 3424464 3427561 hybridization