Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0547 ATGGTTTCAGAAAGAGATCGAGGCAAGTCTTTGAGAAACTCGTGTGCGAAATGTATTCATACGTACGGGAGCAGAAGACTTGACTTGAGTCATCCCAATTCCACAATTGGAGTGTATGAAATGTATTTGGCCCTCTGGATACGCAAGTGCAATAGAGAGTATATGCATGATGTGTTAGTTATTTTGTGTGTGTGTGTGTGGTGTATACAGAAGGAGAAGGAATCAAGCAACAAACAGATGGAAATGGAAAAGTGTAATGGAGGGAAACATGAAACCCTACCGCCGGGATTTCGATTCCATCCTTCAGATGAAGAACTTATCACTCACTATCTCATCAACAAGATCTCTGATTCTAGCTTTACAGGAAGAGCAATCGCTGATGTGGATCTCAACAAATGCGAGCCTTGGGATCTCCCAGGGAAGGCGAAGATGGGAGAGAAAGAATGGTACTTCTTCAGTTTGAGAGATCGCAAGTACCCGACTGGTGTGAGAACAAATCGAGCAACCAACACCGGCTACTGGAAAACCACCGGCAAAGACAAGGAAATCGTCAACGCCGCCACATCGGAGCTCCTTGGCATGAAGAAGACTCTGGTTTTCTACAAAGGCAGAGCCCCAAGAGGCGAGAAAACCAACTGGGTCATGCATGAATACCGCATTCACTCTAAATCCAACAAGCAAGATGAATGGGTGGTCTGCCGAGTGTTTCAGAAGAGTGTGAGTGTGGTAAAGAAGTACCCAAATTCGAACCATACAAGAGGACTCTTCAATCCTTATGGCCTGGACTTAGCAGCTGTTAATATGCAGCCACCGATGAATATGATGCAGCTTGGAGATCCTGCAACTCATTTCCTTTACGAAAGAAATAATAATAATAATTACATAATGATGAATCATTCAGCTGTACCAAGCAATAATAATACTTGTCTGACCCTTCCGATGCAATCCCACATCAACTATCCCGTTACAGCATCAGGAGGGTTCAGTATCTCAGCCCTAAATTTGAATCTGGGAAATACAGTTGCAGGTGGAGCACCCACCTCATCAGAACCCTTTTTGCGACCATTCAGTAACCAACACGATTTGGTGAGCTCTAACAACATAGTGAGCCCTGTCACTTCTCTCGGAGCCAACAACGTAGGTGGCTGCTATGGTGTGGATATGAGGAACGTCAATCCTCAGACGACTCAGAGTAATAAGTATATGGGCATGGTGGATCACTGTGTTGACCTCGATGCTTACTGGCCTTCCTACTAA 1257 0.4479 MVSERDRGKSLRNSCAKCIHTYGSRRLDLSHPNSTIGVYEMYLALWIRKCNREYMHDVLVILCVCVWCIQKEKESSNKQMEMEKCNGGKHETLPPGFRFHPSDEELITHYLINKISDSSFTGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIVNAATSELLGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSNKQDEWVVCRVFQKSVSVVKKYPNSNHTRGLFNPYGLDLAAVNMQPPMNMMQLGDPATHFLYERNNNNNYIMMNHSAVPSNNNTCLTLPMQSHINYPVTASGGFSISALNLNLGNTVAGGAPTSSEPFLRPFSNQHDLVSSNNIVSPVTSLGANNVGGCYGVDMRNVNPQTTQSNKYMGMVDHCVDLDAYWPSY 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0547 418 Pfam No apical meristem (NAM) protein 94 220 IPR003441 GO:0003677|GO:0006355
Lele01g0547 418 FunFam NAC domain-containing protein 100-like 102 242 - -
Lele01g0547 418 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 90 297 - -
Lele01g0547 418 Gene3D NAC domain 102 242 IPR036093 GO:0003677|GO:0006355
Lele01g0547 418 ProSiteProfiles NAC domain profile. 93 238 IPR003441 GO:0003677|GO:0006355
Lele01g0547 418 SUPERFAMILY NAC domain 91 238 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0547 Lele-ChrLele01 3255688 3259095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0547 82 418 NAC Transcription Factor Family AT2G24430 48.315 5.76e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele01g0547 NAM 2.4e-40 No_clan