Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0542 ATGGGAGCTACGGAAATAAAAAATATGGAAATGAAGCGAATCCGGAAACGGCCTCGTCTAACGTGGGACGATGCCCCATCTTCTGAGACCGAGGCGCGAAGGGCTATTGTGGTGGGTGATGGAGTGTTTCAAAATAGGCATGCATCGCCTCCAAGAAGGGACGACTATCGTGAAGGCCATCACGTGTTTAATCATGGCGAAAACCTCACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGACCGTCAAACACGAGAATATGTGGCCATCAAAGTAGTTAGAAGCATACCAAAGTACCGTGATGCGGCAATGATTGAGGTTGACGTGCTTCAACGTCTAGCCAAGAACGAGAGAGGCAATTCACGTTGTGTACACATTCGGAACTGTTTTGATTACCGGAATCATATATGTATTTGTGTTGTTATGTATATGTCAATGTGGGATTTATTCATAGATCTGGGAACTAAGCAGAATCCTTCCTTTCAATTCATTTTGATGGTGTTACCAGATATGCATGACCTACGCTTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTGGTTTCTTCTGATTTCGTACAGATCGCTAGCTGTAAGAGGGTTTTCTCAGACGAGATGCAATTCAGGTGCTTGTCAAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAATACAGCATTTGATAACCAGAATCATAGCTCCATTGTTTGTTCAAGGCATTACCGAGCCCCTGAGATTATTCTAGAGTCTAAAATGGAAAACATTTTGGGGTTTGATGTTGGGCAAAGCACTGTTTCAGACTCACGAAAACTTAGAGCACTTGGCAAGGATGGAGAGACTGCTTGGGCCTTCCCTGAGCATATGGCTCAAAGTTATAAGTAA 918 0.4314 MGATEIKNMEMKRIRKRPRLTWDDAPSSETEARRAIVVGDGVFQNRHASPPRRDDYREGHHVFNHGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIPKYRDAAMIEVDVLQRLAKNERGNSRCVHIRNCFDYRNHICICVVMYMSMWDLFIDLGTKQNPSFQFILMVLPDMHDLRLIHTDLKPENILLVSSDFVQIASCKRVFSDEMQFRCLSKSSAIKLIDFGNTAFDNQNHSSIVCSRHYRAPEIILESKMENILGFDVGQSTVSDSRKLRALGKDGETAWAFPEHMAQSYK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0542 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Lele01g0542 305 ProSiteProfiles Protein kinase domain profile. 73 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0542 305 SMART serkin_6 73 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0542 305 Pfam Protein kinase domain 73 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0542 305 Gene3D Phosphorylase Kinase; domain 1 45 153 - -
Lele01g0542 305 SUPERFAMILY Protein kinase-like (PK-like) 60 262 IPR011009 -
Lele01g0542 305 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 29 264 - -
Lele01g0542 305 Gene3D Transferase(Phosphotransferase) domain 1 169 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0542 Lele-ChrLele01 3238652 3241975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0542 54 202 EF-hand Containing Proteins AT5G22840 32.335 1.71e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele01g0542 Pkinase 4.2e-22 CL0016