Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0536 ATGGAGTATTGCCTACGAGAAATAGAAGGAAAGCGGGCCAATGATCCATTGTTCATTGAAAAAATGAACGACACCAAATTGTCATATCGTGGAAGATGCGTGTGGGTTCCCGGTCCGGTGATCGTCGGAGCGGGGCCTTCTGGTCTCGCAACCGCGGCTTGCCTGAAACAGAAAGGAGTCCCGACTTTGATTCTAGAAAGGTCCGATTGCATAGCTTCTCTGTGGCAGCGCAAAACCTACGATCGCCTCCGTCTTCATTTGCCCAAGCAGTTCTGCGAGCTTCCTTTGATGGGTTTTCCCAGTGATTTCCCGACATACCCCACGAAGCAGCAGTTCATACAGTACTTGGAGAGCTACGCAGAGAGGTTTGACATCAGGCCGAGGTTCAACGAAGCGGTGAGACAGGCGCAATTCGACGCCACGCTTGGTTTTTGGCGCGTGAAAAGCGTGGACCATGCGGATAACACGACGGAGTACTTGTGCCGGTGGGTGATCGTGGCGACGGGAGAGAATGCGGAGGCGGTGGTGCCGGAGATAGAAGGAATGGGGGAATTCGGAGGGGATATAAGGCACACGAGCACGTATAAGAGTGGCGAGGAGTTCAGAGGGAAGAGAGTGTTGGTGGTGGGATGTGGGAATTCCGGCATGGAAGTGTGCTTGGACCTCTGTAACCATAATGCTGCTCCTTCTCTTGCGGTCAGAGATACAGTGCACATATTGCCGAGGGAGATGCTGGGAAAATCGACGTTCGGATTGTCGATGTGGTTGCAGAAGTGGGTGCCGATGAGGGTGGTGGATGCGTTTCTTCTTATAGTTTCGTGGGTGATGCTCGGCGACACCTCTCGCTTCGGACTGAAACGCCCCTCCGTGGGCCCCCTTCTGTTGAAAAACATCTCCGGCAAGACCCCCGTCCTTGACGTCGGCACTCTCTCTAAGATTAAATCCGGCCACATTCAGGTGCGTCCAGGCATTAAGCGGCTAAAACGACATGCCGTTGAATTCGTTGACGGCGAGGCTGAGAATTTTGACGCCATTATACTCGCAACCGGTTACAAAAGCAACGTCCCCTCTTGGCTAAAGGAAGGGGAAATGTTCAGTGAGGAAGATGGATTCCCGAGGAGGCCATTCCCAAATGGTTGGAGAGGTGAAAATGGATTATACTCAGTGGGATTCACGAAACGAGGATTGCTGGGAGCATCGATGGATGCCAAGAGAATATGTGAAGATATTGAGAGATGTTGGAAAGTGGAGACAAAGCATTGCAGTACGTTGGGCTCATCATCGCCACTTTTGCCACTACCCAATTCATGA 1311 0.521 MEYCLREIEGKRANDPLFIEKMNDTKLSYRGRCVWVPGPVIVGAGPSGLATAACLKQKGVPTLILERSDCIASLWQRKTYDRLRLHLPKQFCELPLMGFPSDFPTYPTKQQFIQYLESYAERFDIRPRFNEAVRQAQFDATLGFWRVKSVDHADNTTEYLCRWVIVATGENAEAVVPEIEGMGEFGGDIRHTSTYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNAAPSLAVRDTVHILPREMLGKSTFGLSMWLQKWVPMRVVDAFLLIVSWVMLGDTSRFGLKRPSVGPLLLKNISGKTPVLDVGTLSKIKSGHIQVRPGIKRLKRHAVEFVDGEAENFDAIILATGYKSNVPSWLKEGEMFSEEDGFPRRPFPNGWRGENGLYSVGFTKRGLLGASMDAKRICEDIERCWKVETKHCSTLGSSSPLLPLPNS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0536 436 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 40 419 - -
Lele01g0536 436 Gene3D - 39 419 IPR036188 -
Lele01g0536 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 38 60 - -
Lele01g0536 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 201 225 - -
Lele01g0536 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lele01g0536 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 205 223 - -
Lele01g0536 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 39 58 - -
Lele01g0536 436 FunFam Flavin-containing monooxygenase 39 419 - -
Lele01g0536 436 Pfam Flavin-binding monooxygenase-like 41 356 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele01g0536 436 SUPERFAMILY FAD/NAD(P)-binding domain 202 409 IPR036188 -
Lele01g0536 436 SUPERFAMILY FAD/NAD(P)-binding domain 40 238 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0536 Lele-ChrLele01 3207786 3209958 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0536 01 3207786 3209958 Lele25g0504 25 3177991 3181930 CCT
Lele01g0536 01 3207786 3209958 Lele26g0522 26 3301438 3313126 CCT
Lele01g0536 01 3207786 3209958 Lele27g1574 27 21526203 21529695 CCT
Lele01g0536 01 3207786 3209958 Lele28g0515 28 3271550 3275088 CCT
Lele01g0536 01 3207786 3209958 Lele03g0545 03 3239231 3241419 hybridization
Lele01g0536 01 3207786 3209958 Lele04g0550 04 3334253 3336560 hybridization