Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0513 ATGAGAAGTACGCAAGTTAGCGGTTTCGATCACGGAATTGATTCCCTTCTGGGCCTTCTCCTTCGTCTACGGTCTATCCTTCACTTGTCCCTCAATTATTCCCCAAGAATCCATTCCCCTTTTTACATAACCATTCATCTCTCTCCTTATCTTCATCCTTCATCGTCCATGGATTCTGTATCTTCCAATCCTCGCTTCTCCGATCGAATCCTCCGTGCTCTCCGCCATCCCCTCCTCCTCCTCCACCGCTCCCATTCCTCCTTCTTCATATTGGGCGCCACCGCTAATGTCTACACCGTTACACTCTCCTCCGTCCCCGCCTGCACTTGCCCCGACCGTGCCACCCCTTGCAAGCACATTCTTTTCGTCCTCATTCGAGTTCTCGGCCTCCCCCTCGATCACTTCTGCCTTCGCCGGCGAACCATCCGCCCCACTCAACTCGGCCGCCTCCTCGACCTCCCAACATCTCCGGACGCCCTCGCCGGGGCCGCACTTCGCGAGAGGTTTCACCAGCTTTTCTTCAGTGAAAGGCAGGAACCTAGTATAGAGGTGGAGGATGGGACCACGTGTCCGATTTGTCTGGAGGAAATAGGGAAGGATGACAGAGTCGTCGCCTGTAAGACGTGTCGGAATCCAATTCATGAAGAATGTTTGGTGAAGTGGAAGAGAAGCAGGGGAAGGAGAATGGCTAGTTGTGTGATTTGTAGGGCAAGATGGAGGGGATTGAATGATCAAGATCAGTATCTAAATCTCTCTGCTTTCATTAATCAGGACGATATGGCCGAGACCAGTGGAGATCACTGCAACGGTTAA 813 0.524 MRSTQVSGFDHGIDSLLGLLLRLRSILHLSLNYSPRIHSPFYITIHLSPYLHPSSSMDSVSSNPRFSDRILRALRHPLLLLHRSHSSFFILGATANVYTVTLSSVPACTCPDRATPCKHILFVLIRVLGLPLDHFCLRRRTIRPTQLGRLLDLPTSPDALAGAALRERFHQLFFSERQEPSIEVEDGTTCPICLEEIGKDDRVVACKTCRNPIHEECLVKWKRSRGRRMASCVICRARWRGLNDQDQYLNLSAFINQDDMAETSGDHCNG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0513 270 Pfam Ring finger domain 189 236 IPR001841 -
Lele01g0513 270 Pfam SWIM zinc finger 98 126 IPR007527 GO:0008270
Lele01g0513 270 ProSiteProfiles Zinc finger RING-type profile. 190 236 IPR001841 -
Lele01g0513 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 252 IPR013083 -
Lele01g0513 270 ProSiteProfiles Zinc finger SWIM-type profile. 98 128 IPR007527 GO:0008270
Lele01g0513 270 SUPERFAMILY RING/U-box 181 240 - -
Lele01g0513 270 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 63 243 IPR039903 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0513 Lele-ChrLele01 3048283 3049095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0513 01 3048283 3049095 Lele01g0513 01 3048283 3049095 ECH
Lele01g0513 01 3048283 3049095 Lele04g0519 04 3139715 3140359 hybridization