Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0511 ATGATGGCTGTGAGTTCTGGGTGCAAAGAGGGAAGCAAGGTGGGAATGGAGAACGGTAAGTATGTGAGGTACACGCCGGAGCAGGTTGAAGCTCTGGAGAGGCTTTATCACGAATGCCCTAAGCCCAGTTCCATGCGTCGCCAGCAGCTTATCAGAGAATGCCCCATTCTTTCTAATATCGAGCCCAAGCAGATGAAGGTTTGGTTCCAGAACCGAAGATGTAGAGAGAAGCAGCGGAAGGAATCTATACGCCTGCAATCTGTGAACAGGAAACTGACGGCCATAAATAAACTACTGATGGAGGAAAATGAGAGATTGCAGAAGCAAGTGTCACGGCTGGTTTATGAGAACAGCTTTTTCCGCCAACAGAGACAAAATGCGAGCCTTGCTACGACGGACACAAGCTGTGAATCGGTGGTAACCAGCGGTCAGCACCATGTGACACCTCAGCATCCACCAAGGGATGCCACCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACCTTAACAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGACTGCCCTGGAGTGGCAGCAAGAGCCTGCGGCCTTGTGGGTCTCGAACCTACAAGGGTTGCGGAAATCCTCAAAGATAGGCCCTCGTGGTTTCGTGATTGCCGAGCCTTGGATGTTCTGAATGTGATGCCCACTGGAAACGGGGGAACCATTGAAATGCTTTACATGCAGTTGTATTCGCCTACAACTTTGGCACCTGCTCGTGACTTCTGGTTTCTGCGTTACACATCCGTTTTGGAGGACGGCAGTCTAGTGGTCTGTGAAAGATCGCTCAACAACACCCAGAATGGACCTACAGTACCCCCAGTGCAGCACTTTGTTAGGGCAGATATGCTGCCTAGCGGCTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATTATTCATATTGTTGATCATGTGGATTTAGAGCCCTGGAGTGTTCCTGAAGTGTTGCGCCCGCTTTATGAGTCATCAACGCTGCATGCTCAAAAGACAACAATGGCTGCCTTACGTCATTTGAGGCAGATCTCTCAAGAAGCTTCTCAACCAAATGTCTCCGGATGGGGGAGAAGGCCGGCAGCTCTTCGTGCACTTAGTCAGCGATTGAGCAAGGGATTCAATGAAGCTGTCAATGGATTTGCAGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATTGATGATATCATCCTTCTGGTGAATTCAACTCCCAACAAGATGGTGGGAGTAAATTTTGTTCAGAGCAATGGATTTCCTTATATGAGCAGTTCTGTGCTATGTGCCAAAGCATCAATGCTATTACAGAATGTCCCTCCAGCAATTCTTCTCAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGCTTGCCCGGAGCCCGGTCAGGAAGTTTTGGCGGTCAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTATAGGGATGACATGACTATACCTGAGGATGTTTTCCTCTTGCAACTTTGTAATGGAGCTGATGAGCATGCAAATGGTACCTGTGCAGAACTCATTTTTGCTCCTATTGATGCATCTTTCTCTGATGATGCGCCTATTTTACCTTCTGGTTTTCGCATCATAGCTCTCAATTCTAACACGGATGCTGCAAGTAAAAATCGGACACTTGATCTTGCTTCTTCTCTTGAAGTTAAAACCACAGCTAACAAAGCGGGCAGTGACAACAATGGTAACACAAAATCTGTGATGACAATGGCATTCCAGTTTGCATTTGAAGTTCACCTTCAGGATAGTGTAGCCGCTATGTCCCGGCAGTATGTCCGTAGTATTATTGCATCTGTTCAAAGGGTTGCATTAGCACTCTCCCCTTTGCATTTTGGTTCTCATAATGGCCTGCATGCTCCACCTGGTCCTCCTGAGGCACAGACACTCGCTCGTTGGATCTGTCAAAGTCATAGATGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTATTAAATCCCTTTGGCATCACTCGGATGCGATCTTGTGCTGCTCTTTAAAGGCATTACCCACATTCACATTCGCTAATCAAGCTGGCCTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAGAAAATCTTTGACGACAGTGGAAAGAAAACCCTTTTCTCTGAGTTCCCTCATATAATGCAGCAGATTCTAAAGAGAGATTGTTATGATGATTGCAGGGTTTTATGTGCATGCAAGGTGGAATCTGCGTATCCAGCATGGGGAGGCCAGTGTCGTATGAGAGAGCTGTGGCATGGAAAGTGTCGAACGAAGAAGAAATGGCGCAATGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTGATACTTTAGAGAGAGAGGATATAATCTAA 2532 0.4712 MMAVSSGCKEGSKVGMENGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQMKVWFQNRRCREKQRKESIRLQSVNRKLTAINKLLMEENERLQKQVSRLVYENSFFRQQRQNASLATTDTSCESVVTSGQHHVTPQHPPRDATPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDVLNVMPTGNGGTIEMLYMQLYSPTTLAPARDFWFLRYTSVLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHVDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDIILLVNSTPNKMVGVNFVQSNGFPYMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARSGSFGGQFMEVIKLENMGYYRDDMTIPEDVFLLQLCNGADEHANGTCAELIFAPIDASFSDDAPILPSGFRIIALNSNTDAASKNRTLDLASSLEVKTTANKAGSDNNGNTKSVMTMAFQFAFEVHLQDSVAAMSRQYVRSIIASVQRVALALSPLHFGSHNGLHAPPGPPEAQTLARWICQSHRCYLGVELLKCEGSESIIKSLWHHSDAILCCSLKALPTFTFANQAGLDMLETTLVALQDITLEKIFDDSGKKTLFSEFPHIMQQILKRDCYDDCRVLCACKVESAYPAWGGQCRMRELWHGKCRTKKKWRNAYVSCSSTGLLSDTLEREDII 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0511 843 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Lele01g0511 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 775 IPR044830 GO:0003700
Lele01g0511 843 SUPERFAMILY Homeodomain-like 19 81 IPR009057 -
Lele01g0511 843 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Lele01g0511 843 Gene3D - 194 379 IPR023393 -
Lele01g0511 843 Gene3D - 12 84 - -
Lele01g0511 843 SMART START_1 163 373 IPR002913 GO:0008289
Lele01g0511 843 Coils Coil 85 116 - -
Lele01g0511 843 SMART HOX_1 17 83 IPR001356 GO:0003677
Lele01g0511 843 Pfam MEKHLA domain 682 775 IPR013978 -
Lele01g0511 843 ProSiteProfiles START domain profile. 154 368 IPR002913 GO:0008289
Lele01g0511 843 SUPERFAMILY Bet v1-like 163 375 - -
Lele01g0511 843 Pfam START domain 164 372 IPR002913 GO:0008289
Lele01g0511 843 FunFam Homeobox-leucine zipper protein REVOLUTA 20 75 - -
Lele01g0511 843 CDD START_ArGLABRA2_like 158 373 - -
Lele01g0511 843 CDD bZIP 72 111 - -
Lele01g0511 843 CDD homeodomain 20 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0511 Lele-ChrLele01 3022026 3027299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0511 16 775 Homeobox Transcription Factor Family AT4G32880 77.337 0.0 1241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele01g0511 START 3e-53 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0511 01 3022026 3027299 Lele01g0511 01 3022026 3027299 ECH
Lele01g0511 01 3022026 3027299 Lele03g0519 03 3043125 3048739 hybridization
Lele01g0511 01 3022026 3027299 Lele04g0517 04 3109340 3115630 hybridization