Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0510 ATGGCCCAAGGAGTTCATCAAAAGTTTCCCAAGTGCCTCACGTTATTGTGCCTCGTCATGCTGGAGTTCAATCTCGGCGCCTTTTCACAATCTCATCATGGAGATCAACAAAAACAAGAACTTCAGCTTCTGTTATCCTTCAAGTCTTCTGCCAAGGACCCACGTCGGTCTCTTTCGAATTGGCTCAATTCTTCAGCCACCTTCTGTAACTGGTACGGCCTCACCTGCGACCACAGCTCTTCTCACGTTAACTCCGTCCAACTCTCAGGTAAAAACATGTCCGGCACGATTTCCTCATCCATATTTCAACTCCCAAACGTTACAAATATCGACCTCTCCAGCAATCAGTTCGCTGGTGAAATTTCTTTCTCCTTCCCTTCGTCTCTCTCGTCACTTCGTTACCTTAACCTCAGCAACAACAACCTAACTGGCTTGTTGCCTGATTTTTTGTTTTCTGTGTCGTTTTCCACCCTGGAATCCTTGGATCTTTCAAACAACATGTTTTCCGGGATAATCCCACATCAGGTTGGTGTTCTTTCTAGCCTGAAATACCTTGATGTCGGAGGGAACGTTCTGGTGGGAGGAATTCCAAGTTCCATCACCAACATCACAGGTTTAGAATACTTGACATTGGCTTCAAACCAGTTAGGGGGTGAAATCCCAAGTGACATAGGTGTAATGAAGAGCTTGAAGTGGATTTACATGGGTTACAACAACCTCGCCGGCGAAATCCCGACGAGCATAGGGAACTTATTGTCTCTGCATCATCTCGACCTTGTTTACAACAATCTCACTGGATTCATTCCCGAGTCTCTTGGAAACCTCACAAATCTTGAGTTTCTGTTTCTCTACAAAAACAACCTCCTTGGCCCAATCCCACCTTCCGTTTTCGACCTGAAAAAGCTTGTTTCACTTGATCTCAGCGATAATTCTCTCTGGGGAGAGATTTCTGACCTTGTGATTAATCTCCAGAGACTGGAGATTCTTCAGCTTTTCTCAAACAACTTTACCGGAAAGATTCCGAAGGCTTTAACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACCGATTAACGGGCGAGATTCCAAAAGAGCTGGGAATGCATAGCAACCTCACCGTTTTAGACCTTTCCACCAACAACCTTTCCGGAGAGATACCACAGGGTTTATGTGACAAGAGGAATCTTTTCAAGCTCATTCTTTTCTCTAACTCTCTTGAAGGACAAATCCCTCACAGTTTGGGCTCTTGCACAAGCCTACGCCGAGTACGTCTCCAGAACAACAAGCTTTCCGGTCAATTACCGTCGGAATTCACTAAACTGCCACAGGTATACTTGTTAGACTTGTCCGGCAATAAACTTTCCGGGAGGATCGATAATAGGAAGTGGGACATGCCGGCGCTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCAGGAGAGTTACCCAACTCTTTCGGGAGTAACCACCTGGAGAACTTGGACTTATCGGAGAACCAGTTTTCAGGTTATATTCCACCTGGTATGGGAAGTTTATGGGAGCTCGTGCAGTTGAAGCTTAGAAGAAACAGGCTATCCGGTAACATCCCAAATGAACTTTGTTCGTGCAAGAAGCTTGTGTCTTTAGACCTCAGTCACAATCAGCTTAGCGGGCAGATACCGATTAGTCTAGGAGAGATGCCAGTTCTAGGGATGCTTGATCTGTCTCAAAACCAATTGTGGGGTGAAATCCCCGAAAATTTAGGAAGCGCCGAATCCCTTGTAGAACTCAACATATCCTATAACCATTTTCACGGAAGGTTACCTGCAACAGGAGCTTTCCTCGCTATCAATAGCAGCGACGTCGCTGGGAACGACCTTTGTGAGAGTGATAGTGACAGTAGAAGCGGTTTGCCACCCTGTACCAGAAGAGAAGATAATAAGAACCCATTTTGGTGGTTTTTTCTGTTTGGTCTCGTAGGGTTGCCGCTGGCTGCTTTTCTCCTTGTCTTTATGCGTAGAAGACAGAACTCGGAGGTGACCACAAAACTTGAAAATGAAGATGGCACATGGGAAATGCTCTACTTTGACTCAAAGACTTCAAAACTCATCACCATACACGATGTATTGTCTTCCGCAAAAGAAGGAGTACTCATAATCACCAAAGGACGAAAAGAGACAATGCGATACGAGGTGAAAGAGATGAGTGACCTGAATTGTTTTCCGGAAGACACTGGTAAGCTTCGGCATCCAAACATCGTGAAGTTGAAGGGAATATGCAGGTGTTGGAAAGGAGGGTACTTGGTGTATGAATACATCGACGGAAAATATTTAAGCGACGTCGTTGGGAGTTTAAGCTGGGAAAGACGACTGAATATTGCACTTGGAATTGCAAAAGCACTGAAGTATTTGCATGCTCATGGTTCAGCGTTTGCTTTGGTCGGCGAGATGTCACCCGAGAGAGTTGTGGTGGACGCAAAAGATGTTCCTCGTCTTATGTTGTTCCCTCTCAAGGCCTCCATTTCTTCACCTTACATTGCCCCTGAATCAAGAAATGCGAAGGAGGTGACGGAGAAGAGTGACATGTACGGACTCGGCGTTATTCTGATAGAATTATTGACGGCAAGAAGTTCGGTGGACGAAGAAGTGGGCATGCAGCACGAGAGCATCGTGGAGTGGGCCCGTTATTGCTATTCGGACTGTCATCTAGATACATGGGTCGACCCGAACATGAAGGGTGGGATTGCATCGTCGGCTCAAAACGACATCGTTGAGGTCCTGAACCTTGCCCTCCAGTGCACAGCCACTGATCCCACAGCTAGGCCGAGCGCAAGCCACGTGTTCAAAACCCTAAATTCTCTGACAACTTCCACATCGTCCTGTGTTTAA 2874 0.4603 MAQGVHQKFPKCLTLLCLVMLEFNLGAFSQSHHGDQQKQELQLLLSFKSSAKDPRRSLSNWLNSSATFCNWYGLTCDHSSSHVNSVQLSGKNMSGTISSSIFQLPNVTNIDLSSNQFAGEISFSFPSSLSSLRYLNLSNNNLTGLLPDFLFSVSFSTLESLDLSNNMFSGIIPHQVGVLSSLKYLDVGGNVLVGGIPSSITNITGLEYLTLASNQLGGEIPSDIGVMKSLKWIYMGYNNLAGEIPTSIGNLLSLHHLDLVYNNLTGFIPESLGNLTNLEFLFLYKNNLLGPIPPSVFDLKKLVSLDLSDNSLWGEISDLVINLQRLEILQLFSNNFTGKIPKALTALPRLQVLQLWSNRLTGEIPKELGMHSNLTVLDLSTNNLSGEIPQGLCDKRNLFKLILFSNSLEGQIPHSLGSCTSLRRVRLQNNKLSGQLPSEFTKLPQVYLLDLSGNKLSGRIDNRKWDMPALQLLNLAKNNFSGELPNSFGSNHLENLDLSENQFSGYIPPGMGSLWELVQLKLRRNRLSGNIPNELCSCKKLVSLDLSHNQLSGQIPISLGEMPVLGMLDLSQNQLWGEIPENLGSAESLVELNISYNHFHGRLPATGAFLAINSSDVAGNDLCESDSDSRSGLPPCTRREDNKNPFWWFFLFGLVGLPLAAFLLVFMRRRQNSEVTTKLENEDGTWEMLYFDSKTSKLITIHDVLSSAKEGVLIITKGRKETMRYEVKEMSDLNCFPEDTGKLRHPNIVKLKGICRCWKGGYLVYEYIDGKYLSDVVGSLSWERRLNIALGIAKALKYLHAHGSAFALVGEMSPERVVVDAKDVPRLMLFPLKASISSPYIAPESRNAKEVTEKSDMYGLGVILIELLTARSSVDEEVGMQHESIVEWARYCYSDCHLDTWVDPNMKGGIASSAQNDIVEVLNLALQCTATDPTARPSASHVFKTLNSLTTSTSSCV 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0510 957 Pfam Leucine Rich repeat 537 553 IPR001611 GO:0005515
Lele01g0510 957 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 329 632 - -
Lele01g0510 957 Gene3D Ribonuclease Inhibitor 197 284 IPR032675 -
Lele01g0510 957 SUPERFAMILY L domain-like 50 389 - -
Lele01g0510 957 Gene3D Ribonuclease Inhibitor 348 631 IPR032675 -
Lele01g0510 957 Pfam Protein kinase domain 742 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0510 957 ProSiteProfiles Protein kinase domain profile. 651 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0510 957 ProSiteProfiles Leucine-rich repeat profile. 131 153 IPR001611 GO:0005515
Lele01g0510 957 SUPERFAMILY L domain-like 318 634 - -
Lele01g0510 957 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Lele01g0510 957 PRINTS Leucine-rich repeat signature 299 312 - -
Lele01g0510 957 PRINTS Leucine-rich repeat signature 132 145 - -
Lele01g0510 957 Gene3D Ribonuclease Inhibitor 285 347 IPR032675 -
Lele01g0510 957 FunFam Leucine-rich repeat receptor-like protein kinase 37 198 - -
Lele01g0510 957 SMART LRR_sd22_2 538 559 - -
Lele01g0510 957 SMART LRR_sd22_2 371 394 - -
Lele01g0510 957 SMART LRR_sd22_2 251 277 - -
Lele01g0510 957 SMART LRR_sd22_2 299 318 - -
Lele01g0510 957 SMART LRR_sd22_2 179 205 - -
Lele01g0510 957 Gene3D Transferase(Phosphotransferase) domain 1 732 955 - -
Lele01g0510 957 SUPERFAMILY Protein kinase-like (PK-like) 741 950 IPR011009 -
Lele01g0510 957 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 45 148 - -
Lele01g0510 957 SMART LRR_typ_2 562 586 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 203 227 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 129 152 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 347 371 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 514 538 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 467 490 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 251 274 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 275 299 IPR003591 -
Lele01g0510 957 SMART LRR_typ_2 372 395 IPR003591 -
Lele01g0510 957 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Lele01g0510 957 Pfam Leucine rich repeat 348 408 IPR001611 GO:0005515
Lele01g0510 957 Pfam Leucine Rich Repeat 131 150 IPR001611 GO:0005515
Lele01g0510 957 Pfam Leucine Rich Repeat 253 275 IPR001611 GO:0005515
Lele01g0510 957 FunFam Leucine-rich receptor-like protein kinase family protein 220 318 - -
Lele01g0510 957 Gene3D Ribonuclease Inhibitor 37 196 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0510 Lele-ChrLele01 3015757 3018720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0510 37 946 Receptor kinase-like Gene Family AT2G25790 51.185 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele01g0510 Pkinase 3.5e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0510 01 3015757 3018720 Lele03g0518 03 3032787 3039775 hybridization
Lele01g0510 01 3015757 3018720 Lele04g0516 04 3101761 3104723 hybridization