Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0498 ATGACCATTTTCTATGGACCCCTGACCGCCGGCTCTTTCTTAAGTGGCACAATTTCGCTTCGATCGTGGACCTCATCATCCTCACAGTGCGATTGGCCACAGATACGTTGCGGCGATGGCGTCGTCACCCAGGTCCTTCTCTCAGGAAAAGGTGTCTCCCGGAAGCTACCGCCAGCGATCTGCGACCTCAAGAATCTGACGAAGCTCGACCTCTCAAACAACAACATCCCCGGGGAATTCCCAAGATTTTTGTACAATTGCTCCACTCTCCAATTCCTTGCCCTCTCTCAAAATTACTTAGCTGGCCCAATCCCCGACGACATTGACAGACTCAAAGCTCTGACGTTCTTAGTCCTTAATGGCAACTATTTTTCTGGTGATGTCTCGGCGGCCATCGGGAGATTATCAAAGTTACGAACGCTGTACCTCCACAACAACGAATTCAATGGAACTTGTAGTTTGTTCTCTCTCAAGAATTTACAGTTTCTGTATCTGTACCATAACAAATTATCTGGTGAAATACCTAGTTCGATCCAGGCCTTGAATTTGATTCAAATTGATCTGGCTATGAACAATTTGACGGGTCCGATTCCTGAAGATTTTGGGAAGCTGGAGAGCTTGAAGACACTTGGCCTGTATTTCAATCAATTGTCTGGTCAGATTCCGAGAAGTTTAGGCCTAATCAAAACGCTCAAGTACTTCAAGATGTTTAGCAATAAGTTGAATGGAACTCTTCCTCCAGAAGTAGGCCTATATTCAAAGCTTGAAGTGTTTGAAGTCGCAGACAATCAACTGAGTGGTGCATTGCCCCAATATTTGTGTGCCAAAAATGCTTTGCAAGGTGTGATCGCTTTTTCTAACAATCTTGGTGGAAAGTTGCCGGAATCGGTTGGAAATTGCACTACACTGCGCACCGTTCAGCTTTACAGGAACAATTTTTCTGGTGACATTCCTGCAAGTCTTTGGACTTCCAAGAACTTATCAACCTTGATGTTGAGCGATAACTCGTTTTCTGGTCAACTTCCTAGTAAACTTCCATGGAATATGCTTGACAATAACCAACTTTCCGGTGAACTACCATCCGAGATAGTCTGCTGGCAATCCCTGAATACTTTAACACTCTCTAGCAACAAACTCTCTGGGCAAATTCAAGGAACTATTGGTGATCTCCCTGATCTTGTTGACTTGGACTTGTCTAAAAATGATATATCTGGTGAAATCCCGCGTCAGCTTGGCAATATGAGGCTCATTTTTTTAAACTTGTCCTCCAACAACCTTTTTGGGAGCATCCCAGATGTTTTCAATAACCTCGCATATGACACCAGTTTCTTGAACAATTCCAATCTATGTGCTCACAATCCAAATGTCAAACTTCCAAGATGCTTGGCCAAAACTCCCCGGAATCCAAGCAAATCGTCCTTCAAGTTGCTTTCGTTGATTATTGTTCTCACCATAATTGCGTTGCTAGCCACTGCCTCACTGGCCTTCTATAAGTTCAAAGATAATTCAGGAAAGAATTCCAGGCGCAACCTTTCAACATGGAAGCTTACTTCATTCCAGAGGCTAGACTTCTCTCAATGGAATCTCTTCTCAAACCTGACAGACGATAACCTCATTGGAAGCGGGGGCTTTGAACAAGTTCACCGGATTCCCTCTAAATGTACGGGTGAGTATGTTACTGTAAAAAGGATTTGGAATAGCAAAAGGTTGGATGATAATCTAGAGAAAAACTTCATGTCTGAAGTTGAAATCCTAGGCAACATTCGCCATTCCAATATCGTGAAGCTTCTGTGCTACATTTCAAGTGAGAACTCAAAGCTCCTTGTGTATGAATACAAGGAAAATCGGAGCCTTGATAGATGGCTTCATGGAAAGAGAAAAGCATCGACTACATACCCCGAGAAAGTGGATGTATATAGCTTCGGGGTGGTACTACTGGAGCTGGTAACTGGAAGAGAACCCTATAGCGCAGAGGAGCAGACAAGCCTAGTAGATTGGGCATGGCAGTATCACAATGACGAGAAGTGCCTAGCTGATGCCTTGGACGAAGAAATCAAAGAAGCATGTCATGTGGAGGGGATGATAAAGATCTAA 2094 0.4374 MTIFYGPLTAGSFLSGTISLRSWTSSSSQCDWPQIRCGDGVVTQVLLSGKGVSRKLPPAICDLKNLTKLDLSNNNIPGEFPRFLYNCSTLQFLALSQNYLAGPIPDDIDRLKALTFLVLNGNYFSGDVSAAIGRLSKLRTLYLHNNEFNGTCSLFSLKNLQFLYLYHNKLSGEIPSSIQALNLIQIDLAMNNLTGPIPEDFGKLESLKTLGLYFNQLSGQIPRSLGLIKTLKYFKMFSNKLNGTLPPEVGLYSKLEVFEVADNQLSGALPQYLCAKNALQGVIAFSNNLGGKLPESVGNCTTLRTVQLYRNNFSGDIPASLWTSKNLSTLMLSDNSFSGQLPSKLPWNMLDNNQLSGELPSEIVCWQSLNTLTLSSNKLSGQIQGTIGDLPDLVDLDLSKNDISGEIPRQLGNMRLIFLNLSSNNLFGSIPDVFNNLAYDTSFLNNSNLCAHNPNVKLPRCLAKTPRNPSKSSFKLLSLIIVLTIIALLATASLAFYKFKDNSGKNSRRNLSTWKLTSFQRLDFSQWNLFSNLTDDNLIGSGGFEQVHRIPSKCTGEYVTVKRIWNSKRLDDNLEKNFMSEVEILGNIRHSNIVKLLCYISSENSKLLVYEYKENRSLDRWLHGKRKASTTYPEKVDVYSFGVVLLELVTGREPYSAEEQTSLVDWAWQYHNDEKCLADALDEEIKEACHVEGMIKI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0498 697 FunFam Leucine-rich repeat receptor protein kinase EMS1 346 433 - -
Lele01g0498 697 SMART LRR_typ_2 63 87 IPR003591 -
Lele01g0498 697 SMART LRR_typ_2 157 181 IPR003591 -
Lele01g0498 697 SMART LRR_typ_2 135 154 IPR003591 -
Lele01g0498 697 SMART LRR_typ_2 204 228 IPR003591 -
Lele01g0498 697 SMART LRR_typ_2 390 414 IPR003591 -
Lele01g0498 697 Pfam Leucine Rich Repeat 159 181 IPR001611 GO:0005515
Lele01g0498 697 Pfam Leucine rich repeat 65 123 IPR001611 GO:0005515
Lele01g0498 697 PANTHER LEUCINE RICH REPEAT KINASE 2 156 628 - -
Lele01g0498 697 SUPERFAMILY L domain-like 18 288 - -
Lele01g0498 697 Gene3D Transferase(Phosphotransferase) domain 1 630 692 - -
Lele01g0498 697 Gene3D Ribonuclease Inhibitor 12 154 IPR032675 -
Lele01g0498 697 FunFam Nuclear pore complex protein NUP107 12 154 - -
Lele01g0498 697 SUPERFAMILY RNI-like 227 454 - -
Lele01g0498 697 ProSiteProfiles Protein kinase domain profile. 533 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0498 697 Gene3D Ribonuclease Inhibitor 155 463 IPR032675 -
Lele01g0498 697 SUPERFAMILY Protein kinase-like (PK-like) 515 671 IPR011009 -
Lele01g0498 697 Pfam Protein kinase domain 535 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0498 697 FunFam Highly similar to receptor-like protein kinase 181 345 - -
Lele01g0498 697 Gene3D Transferase(Phosphotransferase) domain 1 517 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0498 Lele-ChrLele01 2958360 2961213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0498 605 697 Receptor kinase-like Gene Family AT5G25930 40.404 1.54e-16 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g0498 Pkinase 1.7e-12 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0498 01 2958360 2961213 Lele03g0508 03 2981619 2984813 hybridization
Lele01g0498 01 2958360 2961213 Lele04g0504 04 3038277 3041465 hybridization