Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0488 ATGGATCGTAAAACCATTTTCTTTCTTGTTCTTGTTTTCATGTATTGTATTCCATTGGTCTTCTGTATTAATACTACCAATCATGATCAGTCTCAGTTTTTTGTTCTCATGAAGGAGTCTTTATCCGGTAAGTACCCGTCCAGTTGGGATGTCACCGGAGGAAAATCTGTGTGCAGCTTCACCGGGGTTGCCTGCAACGACAGAGGAGACGTGGTCAGTCTTGACGTCTCCGGTTGGTCGCTTTCTGGGTACTTGCCTGAAAATATATGCTCTTACCTGCCGGAGTTACGTGTTCTTCGTCTCAGCAATAACCGCCTCAAGGGAAACTTTCCCGACACCATAGTCAACTGTTCCCCCTTGGAAGAGCTCAACATGAGTTCCATGTCTCTTGCTGGGAAGCTTCCTGATTTATCACCTTTGACATCTCTCAAGATTCTTGATCTGTCGTACAACCTTTTCACTGGTCGGTTTCCCATGTCCGTGTTCAACCTCTCCAGTCTCGAGGTCCTTAACTTCAACGAAAATGAAGGCTTCGACTTATGGACGCTTCCGAAGGATGTTTACGAACTAAAAAATCTCCAGTCTATGGTGCTCACAACATGCATGTTGCATGGCCAGATTCCGGCATCCTTAGGGAACCTTACGTCTCTTGTTGATCTTGAGTTGAGTGGAAACTTCCTCACCGGTCCAATTCCTCCGGAGCTTGGAATGCTGAAAAATCTGCAGTATCTTGAGCTTTACTATAACAGTCTTGTTGGTGCAGTACCTGAGGAGCTAGGAAATCTCATGGAGCTCAAAGACGTGGATTTATCAGTCAATAAGTTGACCGGGAAAATCCCAGAATCTCTATGTCGCCTTCCCAAGCTTGAAGTCATACAGCTTTACAACAATAGCCTCACAGGAGAAATCCCAGCTGTGATAGCAAACTCAACATCCTTGAAAATATTGTCTATTTATGACAATTTCCTGAGTGGTCACGTCCCAAGAAATCTGGGTCAGCTCTCAGAACTGGTAGTTTTAGACATGTCCGAAAATCAACTATCTGGTCCATTGCCAACAGGGGTTTGCAAGGGAGGTAAACTGCTCTATTTTCTTGTTCTGGATAATCAGTTTTCTGGGGAACTACCAGACATTTATGCAAAATGCTTCACTCTTTTGAGGTTCAGAGTGAGTAATAACCACTTGCAGGGCTCAGTTCCTAAGGATCTCTTTGGCTTGCCACATGTTTCTATAATTGATTTGGCATACAATAATTTTACTGGTTCTATTTCTGAGTCCATTGGGAATTCTAGAAACTTGTCAGAGCTTTTCATACAGAGGAACCGAATTTCTGGATTCATACCTCCTACCATCTCTCGTGCTACCAATTTTGTCAAGATTGATCTCAGCTATAACCTTCTCTCTGGTCCAATACCTTCAGACATCGGAAACCTGAATAGGCTTAATTCACTGATGCTGCAAGGAAACAAGCTAGATTCTTCCATCCCCAGTTCACTTTCCTTATTCCAGTCCATCAACGTTCTTGATCTCTCCAACAACCTCTTGAGTGGGAGCATCTCTGACAGTCTATCTGCACTCTTACCCAACTACATCAATTTCTCAAACAATATGCTTTCTGGTCCAATTCCTTCCTCATTGATGAAAGGAGGGTTATTAGAAAGCTTTTCAGGGAATCCTGGTCTCTGTGTGTTACCGGTTTATGCTAACTCATCAGACCAGAATTTCCCTGTGTGTTCACAAAGTAGCAGCAAAAAAAGGCCAAGTGTCACATGGGTAGCTCCAATTGCAGTAGCTTTGATCGTCATTGGATTTGTAGCTCTATTGGTTACAAGACGTAGGCCTGCCAAAGATAAGGCAACCCTGGAACAAGATGATGAGTCAGTATCTTCTTCATTCTTCTCTTACGACTTGAAGAGCTTCCACAAATTGAATTATGATCGGCAGGAGATCATTGAGGCCATGGTGGATAAGAACATAGTGGGATACGGTGGATCTGGGACAGTGTACAAGATTGAGTTGAAAAGCGGTGAACTTGTTGCAGTCAAGAAGCTATGGAGTCGAACATCAAAGGATTCAGCTCAAGAGGATCGCATGGTTTTGGACAAGGAGTTGAAGAACGAGGTGGCAACCTTGGGAAATATAAGACACAAGAACATAGTCAAACTTTACAGCTACTTCACCAGCTTTGACTTCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATGCCCTTCACAAAAATTGGATAAATTTGACTTGGCCAACTCGTCATCAGATCGCTCTAGGGATAGCTCAAGGCTTAGCATACCTCCACCACGATCTGCTTCCTCCAATTATTCACAGAGACATCAAGTCTACGAACATCCTTCTAGATGCTCATTACCAGCCCAAGGTTGCAGATTTTGGAATAGCCAAGGTTTTACAAGCAAGAGGAGGCAAAGATTCCACCACAACTCTAATTGCAGGAACCTATGGTTACTTAGCCCCAGAATATGCATATTCATCAAGAGCAACAACCAAGGGTGATGTCTACAGTTTTGGGGTGATTCTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAAGCTGAGTTTGGAGAGAACAGGAATATTGTGTATTGGGTTTCAAACAAAGTAGAGAGCAAGGAAGGAATTAATGAAATAATAGACAAGAGATTATCAGGATTATTCAGGGATGAAATAATACAAGTGATCCGAATTGCCATTAAGTGCACCTACAAATCTCCTGCTAATCGACCTACCATGAAAGAGGTGGTTCAGCGACTCATTGAAGCAGACCCATGCAGATTCGATTCTGGCAAGTTGTCAGCAGCAGACAAGACCAATACCAAATAA 2865 0.4307 MDRKTIFFLVLVFMYCIPLVFCINTTNHDQSQFFVLMKESLSGKYPSSWDVTGGKSVCSFTGVACNDRGDVVSLDVSGWSLSGYLPENICSYLPELRVLRLSNNRLKGNFPDTIVNCSPLEELNMSSMSLAGKLPDLSPLTSLKILDLSYNLFTGRFPMSVFNLSSLEVLNFNENEGFDLWTLPKDVYELKNLQSMVLTTCMLHGQIPASLGNLTSLVDLELSGNFLTGPIPPELGMLKNLQYLELYYNSLVGAVPEELGNLMELKDVDLSVNKLTGKIPESLCRLPKLEVIQLYNNSLTGEIPAVIANSTSLKILSIYDNFLSGHVPRNLGQLSELVVLDMSENQLSGPLPTGVCKGGKLLYFLVLDNQFSGELPDIYAKCFTLLRFRVSNNHLQGSVPKDLFGLPHVSIIDLAYNNFTGSISESIGNSRNLSELFIQRNRISGFIPPTISRATNFVKIDLSYNLLSGPIPSDIGNLNRLNSLMLQGNKLDSSIPSSLSLFQSINVLDLSNNLLSGSISDSLSALLPNYINFSNNMLSGPIPSSLMKGGLLESFSGNPGLCVLPVYANSSDQNFPVCSQSSSKKRPSVTWVAPIAVALIVIGFVALLVTRRRPAKDKATLEQDDESVSSSFFSYDLKSFHKLNYDRQEIIEAMVDKNIVGYGGSGTVYKIELKSGELVAVKKLWSRTSKDSAQEDRMVLDKELKNEVATLGNIRHKNIVKLYSYFTSFDFSLLVYEYMPNGNLWDALHKNWINLTWPTRHQIALGIAQGLAYLHHDLLPPIIHRDIKSTNILLDAHYQPKVADFGIAKVLQARGGKDSTTTLIAGTYGYLAPEYAYSSRATTKGDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVESKEGINEIIDKRLSGLFRDEIIQVIRIAIKCTYKSPANRPTMKEVVQRLIEADPCRFDSGKLSAADKTNTK 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0488 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 212 - -
Lele01g0488 954 ProSiteProfiles Protein kinase domain profile. 654 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0488 954 SMART serkin_6 654 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0488 954 SUPERFAMILY L domain-like 269 565 - -
Lele01g0488 954 FunFam Leucine-rich repeat receptor-like protein kinase 181 282 - -
Lele01g0488 954 FunFam receptor protein-tyrosine kinase CEPR1 637 738 - -
Lele01g0488 954 SUPERFAMILY RNI-like 71 370 - -
Lele01g0488 954 FunFam Receptor protein-tyrosine kinase CEPR1 286 572 - -
Lele01g0488 954 Gene3D Phosphorylase Kinase; domain 1 637 738 - -
Lele01g0488 954 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Lele01g0488 954 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 950 - -
Lele01g0488 954 Gene3D Transferase(Phosphotransferase) domain 1 739 942 - -
Lele01g0488 954 ProSitePatterns Protein kinases ATP-binding region signature. 660 683 IPR017441 GO:0005524
Lele01g0488 954 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Lele01g0488 954 Gene3D Ribonuclease Inhibitor 237 310 IPR032675 -
Lele01g0488 954 Pfam Protein kinase domain 656 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0488 954 Gene3D Ribonuclease Inhibitor 311 573 IPR032675 -
Lele01g0488 954 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 28 180 - -
Lele01g0488 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Lele01g0488 954 Gene3D Ribonuclease Inhibitor 180 236 IPR032675 -
Lele01g0488 954 SMART LRR_typ_2 478 502 IPR003591 -
Lele01g0488 954 SMART LRR_typ_2 93 117 IPR003591 -
Lele01g0488 954 SMART LRR_typ_2 334 358 IPR003591 -
Lele01g0488 954 SMART LRR_typ_2 238 262 IPR003591 -
Lele01g0488 954 SMART LRR_typ_2 140 164 IPR003591 -
Lele01g0488 954 SMART LRR_typ_2 286 310 IPR003591 -
Lele01g0488 954 CDD STKc_IRAK 660 934 - -
Lele01g0488 954 SUPERFAMILY Protein kinase-like (PK-like) 645 932 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0488 Lele-ChrLele01 2893500 2897216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0488 26 937 Receptor kinase-like Gene Family AT5G49660 63.755 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g0488 Pkinase 4.9e-49 CL0016