Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0487 ATGTGCCAGTTTATCAAAGCTCATAATCTTGTGAGTGGTAATGCTTTAGGAAAAGTAGCATTAACTTTCCTCATCCACGCTTTCATATGGCAAAAAGAAAACAAGTACTGGAGGGAGAAAGGGACCGACCGTTGTAACGAAAATACAAATTTCCGCGTTATATCACCCGTTTGGCTGAGGCGCCTCTTCTTCTTTTGCGTCAAGTTTCTTCATTTCACACCATCATCAACAAGGTCTCCTCCCTTGCGTCCTCCCTCCTCCAACATGTTCCTCTCTCTCCCCTATCTCTTCTGCCTCCTTTCCTTCCTCTCCGGTCTTCAATCCGACGACCGTCAACTCCTTCTCAACTTGAAATCCGCGCTACAGAATGAGTCAACCTCCCCTGTGTTTGACTCCTGGAATTCCACCAATTCCGTCTGCAATTTCTACGGGATTGCCTGCAACTCCGACGGTTCCGTTACGGAAATCGATCTTTCATCTCAGAAGCTATCTGGGGTTCTGACTCTTGACTCCATTTGTAAGCTTCCTTCTCTACGGAAGCTCGCATTCGGGTTCAATTCCTTGCACGGCAGAGTTGCAGAGGATTTGAGAAACTGTGTCAACTTGGTATACTTGGACTTGGGAAACAACGATTTCTCAGGGTCGTTTCCCGATATATCTCCTCTCAACCAGTTGCAATATCTGTTTTTAAATCAAAGCGGATTCTCTGGAAATTTCCCATGGAAGTCTCTGCTAAACATGACGCTTCTCGTGCGGTTAAGCGTTGGAGATAACCCTTTTCAGCGCGCACCTTTTCCAACTGAGGTGGTCAATCTCAAAAGCCTCCAGTGGCTCTATTTAGCGAATTGTAGCGTCGAAGGGGAAATACCGGCGGGAATAGGAAATCTCACTGAACTTGTCAATTTAGAGTTGTCGGACAATTTTATATCTGGCGAGATTCCTTCGGAGATTGGGAATCTTCGGAAGCTATGGCAGTTTGAGTTCTACAACAACAAAATAACTGGGAAATTTCCAAACGGGTTCAGAAGTCTCACAAGCCTTGGGAAATTGGACGGGTCCATGAATCAGCTTGAAGGCGATCTTTCCGAGTTGAGGTTCTTGAATAATCTTGTTACCCTGCAACTATTTGAAAACAACTTAACAGGGGAAATTCCCCCTGAGTTCGGTGAATTCAAAAAGCTCGTGAATCTCTCTTTGTACAATAATCACTTGTCGGGGCCCATTCCTCAGAAACTAGGCTCTTGGGCAGAGTTTGATTTCATCGACGTAACGGAGAACATGTTGACGGGTCCTATTCCGCCTGATATGTGCAGAAAGGGAAAGATGCAGAGACTGCTCGTACTTCAGAACAAGCTCTCCGGGGAAATACCCGCTACTTACGCGAACTGCACGACACTCATTCGATTCAGAGTCAACGATAACTTGCTTTCGGGGACGGTTCCTTCTGGAATATGGGGATTGCCGAACGCGGAGATAATCGATGTTGAACTGAATCAGTTGGAAGGTTCAATTACCTCAGATATCAAGAACGCGAAGGCCCTAGCCACTATACATGCTAGAAGGAACCGCTTGTCCGGTGAGATACCGAAGGAAATTTCAGAAGCAACGTCCTTAGTGACGATTGATCTGAGTGAGAATCAAATTTCCGGGGAAATTCCATCGGGTATTGGGAAGCTGAAAAGTTTGAGCAGTCTTTATTTACCGAGCAACATGTTATCTGGGTCTATACCTGACTCTTTGGGGTCATGCACTTTCCTTAGTGATATCGAACTGGCAAAGAATTCACTCTCTGGAAATATCCCTTCATCTCTGGGTCATTTACCAGTACTTAATGCATTGAATTTGTCCCAAAACGAACTCACCGGTGCGATTCCGGCGAGTTTCACACTCCTCCGGTTGAGCCTTTTTGATCTATCGAACAACCGGTTAACAGGTCCAATCCCACAATCTCTATCCATTCAAGCTTTCAACGGTAGTCTCGCTGGAAACCCAGGTCTCTGCACTCTTGACGCGATCGACTCTTTCAGTCCTTGTTCTGCTCATTCAGGCATACCCAGAAACGTCCGTACACTTATCATTTGCTTCACAGTAGCTTTGATCTTGCTTCTTGCTTGTTTGGCTCTTTACATGAAGCTGAATAAGAGGGATAAATATCGGGAACGCTCTTTGAAGGAAGAATCCTGGGACCTGAAATCCTTCCACGTGCTGAGTTTCACTGAGGACGAGATTCTGGATTCCATTAAGCAAGATAATCTAATAGGGAAAGGAGGATCAGGAAACGTCTACAGAGTCCCACTCTCAAACGGTAAAGAACTCGCAGTTAAGCACATATGGAACATGGACTCTACTAGCCGGAAGAAGAGCAGAAGTAGTACTCCGATCGGAAAACATGACATCAAGTCCAAGTCCAAGGAATTCGATGCAGAAGTGGAGACACTGAGCTCCATAAGACACGTGAACGTCGTGAAACTTTACTGCAGCATCACAAGCGAAGATTCCAGCTTGCTGGTTTATGAGTATCTTCCGAATGGAAGCTTATGGGATCGGCTTCACTCAAGTGGAAAGATAGAACTGGGCTGGGAAAAAAGATATGAAATTGCAGTCGGAGCCGCCAAGGGATTGGAGTACTTACATCATGGGTGTGAGAGGCCGGTAATTCACAGAGACGTAAAATCAAGTAACATTTTATTGGATGAGCTCATGAAGCCCAGGATTGCTGATTTCGGACTTGCCAAGATTGTTCGGCCCAATGTTGGCCAGGATTCTACGCAAGTCATTGCAGGGACACATGGGTATATTGCTCCAGAATATGGGTACACATATAAAGTGAATGAGAAAAGTGACGTGTACAGCTTCGGGGTGGTGTTGATGGAGCTAATAACGGGGAAGAAGGCAATAGAAGCTGAGTATGGGGAAAACAAAGACATAGTGAGCTGGGTGTGCAGCAAGATGCAGGGTGAGGAGAGAATAATGAGTTTGGTGGATTCAAGAATACAGGAAATGTATAAGGAGGAGGCTGTGAAGATGTTGAAAATAGCGATTCTGTGCACGGCAAGGCTTCCAGCTCTGAGGCCTACCATGAGAAGTGTGGTTCAAATGCTTGAGGATGCTGAGCCTTGTAAATTTGTTGGAATCGTCATTAGCAAAGACGGCTCTGAAAAGACTAAGCTCAAGCCAAGCACTTAG 3186 0.4557 MCQFIKAHNLVSGNALGKVALTFLIHAFIWQKENKYWREKGTDRCNENTNFRVISPVWLRRLFFFCVKFLHFTPSSTRSPPLRPPSSNMFLSLPYLFCLLSFLSGLQSDDRQLLLNLKSALQNESTSPVFDSWNSTNSVCNFYGIACNSDGSVTEIDLSSQKLSGVLTLDSICKLPSLRKLAFGFNSLHGRVAEDLRNCVNLVYLDLGNNDFSGSFPDISPLNQLQYLFLNQSGFSGNFPWKSLLNMTLLVRLSVGDNPFQRAPFPTEVVNLKSLQWLYLANCSVEGEIPAGIGNLTELVNLELSDNFISGEIPSEIGNLRKLWQFEFYNNKITGKFPNGFRSLTSLGKLDGSMNQLEGDLSELRFLNNLVTLQLFENNLTGEIPPEFGEFKKLVNLSLYNNHLSGPIPQKLGSWAEFDFIDVTENMLTGPIPPDMCRKGKMQRLLVLQNKLSGEIPATYANCTTLIRFRVNDNLLSGTVPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKALATIHARRNRLSGEIPKEISEATSLVTIDLSENQISGEIPSGIGKLKSLSSLYLPSNMLSGSIPDSLGSCTFLSDIELAKNSLSGNIPSSLGHLPVLNALNLSQNELTGAIPASFTLLRLSLFDLSNNRLTGPIPQSLSIQAFNGSLAGNPGLCTLDAIDSFSPCSAHSGIPRNVRTLIICFTVALILLLACLALYMKLNKRDKYRERSLKEESWDLKSFHVLSFTEDEILDSIKQDNLIGKGGSGNVYRVPLSNGKELAVKHIWNMDSTSRKKSRSSTPIGKHDIKSKSKEFDAEVETLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHSSGKIELGWEKRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDELMKPRIADFGLAKIVRPNVGQDSTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELITGKKAIEAEYGENKDIVSWVCSKMQGEERIMSLVDSRIQEMYKEEAVKMLKIAILCTARLPALRPTMRSVVQMLEDAEPCKFVGIVISKDGSEKTKLKPST 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0487 1061 ProSitePatterns Protein kinases ATP-binding region signature. 753 775 IPR017441 GO:0005524
Lele01g0487 1061 SUPERFAMILY L domain-like 369 675 - -
Lele01g0487 1061 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 841 1048 - -
Lele01g0487 1061 Gene3D Ribonuclease Inhibitor 553 673 IPR032675 -
Lele01g0487 1061 FunFam Probable inactive receptor kinase RLK902 107 266 - -
Lele01g0487 1061 Pfam Protein kinase domain 749 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0487 1061 SUPERFAMILY L domain-like 147 477 - -
Lele01g0487 1061 Gene3D Transferase(Phosphotransferase) domain 1 841 1043 - -
Lele01g0487 1061 FunFam Receptor-like protein kinase HAIKU2 730 840 - -
Lele01g0487 1061 SUPERFAMILY Protein kinase-like (PK-like) 739 1035 IPR011009 -
Lele01g0487 1061 SMART serkin_6 747 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0487 1061 CDD STKc_IRAK 753 1035 - -
Lele01g0487 1061 Pfam Leucine rich repeat N-terminal domain 108 148 IPR013210 -
Lele01g0487 1061 FunFam Leucine-rich repeat receptor-like protein kinase TDR 364 680 - -
Lele01g0487 1061 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 101 1034 - -
Lele01g0487 1061 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Lele01g0487 1061 ProSiteProfiles Protein kinase domain profile. 747 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0487 1061 Gene3D Phosphorylase Kinase; domain 1 730 840 - -
Lele01g0487 1061 Gene3D Ribonuclease Inhibitor 438 552 IPR032675 -
Lele01g0487 1061 Gene3D Ribonuclease Inhibitor 108 263 IPR032675 -
Lele01g0487 1061 Gene3D Ribonuclease Inhibitor 264 364 IPR032675 -
Lele01g0487 1061 Gene3D Ribonuclease Inhibitor 365 437 IPR032675 -
Lele01g0487 1061 FunFam Leucine-rich receptor-like protein kinase family protein 267 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0487 Lele-ChrLele01 2887125 2890394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0487 97 1056 Receptor kinase-like Gene Family AT1G09970 62.487 0.0 1177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g0487 Pkinase 2e-42 CL0016