Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0486 ATGCTTTACACCGCCACAACACAACCTGTGACATCTCTTCCTTTTCCTTGAGGACACAATAAAAAACTCAAAAAAATGGCAGAAATGGCACAGCAGCAGAATTTGCAGAGTTCATTTCAGAGCTTCTTCGAGGGATGGCTTTCCCGCCAACAGAGCTTCCTCGACCAGCTTCTCACTCTCTCCCTTGCTCCACACTCTCCCCTCAAAATGGAGCAACAGAAGGCCCTAATCGACCAAGTCCTCTCTCATTATCTGCAATACTTTCAGGAGAGATCCAGACTCGCCTATCACGATATCTTCCTCCTTTTTTCCCCGGCCTGGTTAACTTCTTACGAGCGAGCTCTCATCTGGATTGCGGACTACAAGCCTTCCCTGGTGCTTCGTCTGGTGGACTGCGCCGTCGGTGATTTATCGCCAGAACAGAAGGTGACGCTGGAGCGAGTCAAGGAAGATACCAGGAGGCAGGAGCGGGTCGTGACGGGGGCAATGGCAAGCGTTCAGGAGATCCTCGGAGGACCGTCGATGCTGCAATTGGCGAGGCGAGTGGGGAGGCTGGTCGATGGGGAAATTGATGAGCTGGACTCTCCCTGGGAAGTGCTGAAGAACGCAATGATGGGGGTAGTGGAGAAAGCCGACGAGCTGCGAGTGTCGACGGCGAGGATGGTGGTAGAAATTCTGAATCCGTCGCAGACGGTGCAGTTTCTGGCGGCGGCGGCTCAGTTTCAGCTTCGCATACGGAGTTTGGGGACGCGGTTGGACTCGCGATTCAGAGGGGGTAGAGCTGGTGGCCTGTCCAGGGACCCATGA 807 0.5452 MLYTATTQPVTSLPFPXGHNKKLKKMAEMAQQQNLQSSFQSFFEGWLSRQQSFLDQLLTLSLAPHSPLKMEQQKALIDQVLSHYLQYFQERSRLAYHDIFLLFSPAWLTSYERALIWIADYKPSLVLRLVDCAVGDLSPEQKVTLERVKEDTRRQERVVTGAMASVQEILGGPSMLQLARRVGRLVDGEIDELDSPWEVLKNAMMGVVEKADELRVSTARMVVEILNPSQTVQFLAAAAQFQLRIRSLGTRLDSRFRGGRAGGLSRDP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0486 268 Pfam Seed dormancy control 65 130 IPR025422 GO:0006351|GO:0043565
Lele01g0486 268 ProSiteProfiles DOG1 domain profile. 36 255 IPR025422 GO:0006351|GO:0043565
Lele01g0486 268 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 38 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0486 Lele-ChrLele01 2880365 2881322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0486 37 257 Calmodulin-binding Proteins AT5G65210 25.225 4.36e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0486 01 2880365 2881322 Lele03g0494 03 2894792 2895520 hybridization
Lele01g0486 01 2880365 2881322 Lele04g0493 04 2963314 2964036 hybridization