Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0478 ATGTCTACACTGCTACTCGGCATAGGGGAGGACAAAGGTCAAAGCGATGTCAGTTTGTTGGCCTCCTCAACGACCATGGAAAGTGTTTGCCTCAACAGCTCCAAACTGAAAGAACGCAACTACATGGGATTATCTGATTGTTCTTCAGTGGACAGCTCAGCTCAGTCCTTCTCTGATGAAAGTAAAAATAGGCTGAACCTAAGAGCTACAGAGCTGAGGCTCGGGCTTCCGGGATCTCAGTCTCCTGAAAGAGAAGACTCAGATCATCGCTGCTTTGAAAGTTCTCAATTTGATGAGAAACCTCTTTTTCCCTTGCATCCTTCAACGGATGATCAAAACCGCTCTTCAAAGAATGTTGTTCTGGGTAACAAAAGAGGGTTCTCAGATGCTATGAATGAGTTCTCCAAGTGGCAATTCCTAGCAAATTCGGAGGGGAATACAATTTTGTCACCTAGACCATCTCCTAATTTAGGATTGAAAACTAGTTCTAGGCTTGATAAAGCGAAAGAAGCAGCACCACCAAAGGTGGAACAAGAGAGTCCCCGTGTTGTGAACGAAACCAAACCAAACCATAGTGTTTCTGCAAATAATAGCGGTACACCTGCTGCTAAGGCACAGGTTGTGGGTTGGCCTCCTATTAGATCATTTAGGAAAAATGCATTGGCCACCACTAAGAAAAATACTGAAGAAGTAGATGGAAAAGCACTGTTTGTCAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGACTTGAAGAATTACAGCGCATATCCAGAACTATCTTCTTCTCTGGAGAAGATGTTCAGTTGTTTTACCTTAGGTCAATGTGGATCTAATGGAACTCTGGGTAAGGGGATACTGAATGAAAGCAAGATGAGAGATCTGCTTCGAGGGATAGCAAATTTATACTACAGAGATGCATTACTCACAGCATTGCGGTTTGAAAACTAGATATGGGGATTAGTTCTTGATGTGACGCAGGATCTGTAG 996 0.4307 MSTLLLGIGEDKGQSDVSLLASSTTMESVCLNSSKLKERNYMGLSDCSSVDSSAQSFSDESKNRLNLRATELRLGLPGSQSPEREDSDHRCFESSQFDEKPLFPLHPSTDDQNRSSKNVVLGNKRGFSDAMNEFSKWQFLANSEGNTILSPRPSPNLGLKTSSRLDKAKEAAPPKVEQESPRVVNETKPNHSVSANNSGTPAAKAQVVGWPPIRSFRKNALATTKKNTEEVDGKALFVKVSMDGAPYLRKVDLKNYSAYPELSSSLEKMFSCFTLGQCGSNGTLGKGILNESKMRDLLRGIANLYYRDALLTALRFENXIWGLVLDVTQDL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0478 331 MobiDBLite consensus disorder prediction 145 180 - -
Lele01g0478 331 Pfam AUX/IAA family 70 301 IPR033389 -
Lele01g0478 331 MobiDBLite consensus disorder prediction 82 96 - -
Lele01g0478 331 MobiDBLite consensus disorder prediction 187 206 - -
Lele01g0478 331 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 291 IPR003311 GO:0005634|GO:0006355
Lele01g0478 331 MobiDBLite consensus disorder prediction 163 180 - -
Lele01g0478 331 MobiDBLite consensus disorder prediction 145 161 - -
Lele01g0478 331 MobiDBLite consensus disorder prediction 187 203 - -
Lele01g0478 331 Gene3D - 229 313 - -
Lele01g0478 331 MobiDBLite consensus disorder prediction 74 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0478 Lele-ChrLele01 2820835 2823052 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele01g0478 AUX_IAA 7e-52 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0478 01 2820835 2823052 Lele01g0478 01 2820835 2823052 ECH
Lele01g0478 01 2820835 2823052 Lele03g0486 03 2831905 2833872 hybridization
Lele01g0478 01 2820835 2823052 Lele04g0483 04 2902711 2904640 hybridization