Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0474 ATGGTGGTGAGGAAGGTGGGGAAGTACGAAATCGGGAGGACAATTGGGGAGGGAACCTTCGCCAAGGTGAAGTTTGCTCAGAACACAGAGACTGGCGAGAGTGTCGCTATGAAAGTGCTCGACCGTAGCAACATCATCAAGCACAAAATGGTCGATCAGATAAAGAAGGAGATTTCTATTATGAAGCTAGTTCGGCATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGTCGTACTAAGATTTACATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGATAAAATTGTACAACATGGCCGTCTTAGTGAAGCTGAAGCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTCTATCACAGAGATTTGAAGCCTGAAAATTTATTGCTAGATTCTCTAGGGAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGTGTCCTTCGGACAACTTGTGGGACTCCAAACTATGTAGCCCCTGAGGTACTTAGTCACAAGGGTTACAATGGAGCAGCGGCAGATGTTTGGTCCTGTGGGGTTATTCTCTATGTTCTAATTGCTGGATATCTACCTTTTGATGAGCTGGATCTAACTACCTTATACACTAAGATTGAGAATGCAGAGTTTTCAATCCCTTCATGGTTTCCTGTGGGAGCAAAAGCTTTAATACATAGAATTTTGGACCCAAATCCTGAAACTCGCATTACCATTGAACAGATAAGAAGTGATGAGTGGTTTCAGAAGAACTATGTTCCTGTCAGTCTTCTTGTGTATGAAGATGTGAATCTGGATGATGTAAATGCAGCTTTTGATGATGCTGAGAGAGTCAATCAACAATGTGAGAATGAAGACGGGGGTCCATTAATGCTTAATGCATTTGACTTGATAATTCTATCTCAAGGTTTAAATCTCGCTACAATCTTTGATCGTGGACGGGATTCCATGAAGTACCAAACACGCTTTATCTCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGCATGGAAGTTGTGGCTCAATCAATGGGATTTAAGACACATATTCGCAACTATAAGATGAGAGTAGAGGGTATGGCAGCAAATAAAACTTTTTTCTCAGTCATCCTGGAAATTTTTGAAGTTGCTCCGTCATTCTTCATGGTGGACATTCAGAAAGCAGCTGGAGACGTTGGTGAATACCTCAAGTTTTACAAGAACTTCTGTAGCAATCTTGATGATATCATCTGGAAACCGCCTTATGAAGAAAGCAAATCAAGGAGCTCCAACAATAAAAGTAGAAGGCGATCCTTTCACTTCATGTGA 1347 0.4098 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSNIIKHKMVDQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVQHGRLSEAEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKISDFGLSALPEQGVSVLRTTCGTPNYVAPEVLSHKGYNGAAADVWSCGVILYVLIAGYLPFDELDLTTLYTKIENAEFSIPSWFPVGAKALIHRILDPNPETRITIEQIRSDEWFQKNYVPVSLLVYEDVNLDDVNAAFDDAERVNQQCENEDGGPLMLNAFDLIILSQGLNLATIFDRGRDSMKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGMAANKTFFSVILEIFEVAPSFFMVDIQKAAGDVGEYLKFYKNFCSNLDDIIWKPPYEESKSRSSNNKSRRRSFHFM 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0474 448 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Lele01g0474 448 SUPERFAMILY Protein kinase-like (PK-like) 6 281 IPR011009 -
Lele01g0474 448 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lele01g0474 448 Gene3D Kinase associated domain 1, KA1 302 425 - -
Lele01g0474 448 CDD CIPK_C 307 421 - -
Lele01g0474 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lele01g0474 448 Coils Coil 279 299 - -
Lele01g0474 448 FunFam Non-specific serine/threonine protein kinase 301 424 - -
Lele01g0474 448 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0474 448 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Lele01g0474 448 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0474 448 FunFam Non-specific serine/threonine protein kinase 2 301 - -
Lele01g0474 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 408 - -
Lele01g0474 448 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0474 448 Gene3D Transferase(Phosphotransferase) domain 1 3 301 - -
Lele01g0474 448 Pfam NAF domain 303 361 IPR004041 GO:0007165
Lele01g0474 448 MobiDBLite consensus disorder prediction 429 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0474 Lele-ChrLele01 2785570 2790631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0474 1 385 CBL-interacting serine-threonine protein kinases AT4G24400 82.946 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele01g0474 Pkinase 2.1e-72 CL0016