Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0467 ATGGCTGCTTTGTCTGATGACGCCACCAGTATATGTGCTCACTGTGATCGTGCTATCCCTGCTGCAAATATTGCTCTGCATTACGCCCATTGCTCCCGGAACCTTGAAAAATGCACAATCTGTGGTGATATGATTCCAAAAAGAAACTCCGAGGACCACTTTTTAAGCACGCATGCACAGGCTGGGATTTGTAGGGTAAATGATCTGAGTCTTGATTTAGTTGCTACCAGTTCAAAAATTGAAGTCTTGGTGGCAGTTATAGCTAATCTCTGTTTGAATTGTTTGGTGTTGGAACATGCATTTGAACTGGTAGTGGTCGGGATTGGGGTTGTGTGGGTTGGTGTTACTATCTGGGTTCCCTTTCATCAGGGCAGAGTCAAGAGCTCTTCAGCTTCTCAAACTTCTCTTGGTAGTCATGCTACTGCTATGCTTTCCCTTCAAGGTGAACACAAAGCCACTGAATCCTCTAGTCTGCTGGGGCGTGTCAGTGTTAAGAATTTCTTGGCATCAGAGACCAATCCACAGAAATCACTATAA 537 0.4469 MAALSDDATSICAHCDRAIPAANIALHYAHCSRNLEKCTICGDMIPKRNSEDHFLSTHAQAGICRVNDLSLDLVATSSKIEVLVAVIANLCLNCLVLEHAFELVVVGIGVVWVGVTIWVPFHQGRVKSSSASQTSLGSHATAMLSLQGEHKATESSSLLGRVSVKNFLASETNPQKSL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0467 178 SUPERFAMILY TRAF domain-like 12 69 - -
Lele01g0467 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 60 IPR013083 -
Lele01g0467 178 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0467 Lele-ChrLele01 2740951 2743114 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0467 01 2740951 2743114 Lele01g0467 01 2740951 2743114 ECH
Lele01g0467 01 2740951 2743114 Lele04g0470 04 2812300 2821877 hybridization