Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0450 ATGCATAAGCCTGAGTGGATGGCTCCTGAATTCCTTCGCGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTCATCTTGTGGGAGCTTGTGACCATGCAACAACCGTGGAGTGGTCTTAGTCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAAAATAGGAGGCTTGTTATCCCTCCAAACATCTCCCCAGCACTTGGCGCTCTCATGGAATCTTCTTGGGCTGATGACCCAAATGAACGACCATCTTTCGCTAACATAGTGGACTCGCTGAAGAAGCTGCTGAAGTCTCCAGCTGAGGTTATAAAAATGGGTGGGACATGA 333 0.4865 MHKPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLVIPPNISPALGALMESSWADDPNERPSFANIVDSLKKLLKSPAEVIKMGGT 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0450 110 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Lele01g0450 110 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 99 - -
Lele01g0450 110 SUPERFAMILY Protein kinase-like (PK-like) 4 93 IPR011009 -
Lele01g0450 110 Pfam Protein tyrosine and serine/threonine kinase 4 94 IPR001245 GO:0004672|GO:0006468
Lele01g0450 110 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0450 Lele-ChrLele01 2639575 2640793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0450 4 109 MAP Kinase Kinase Kinase AT4G24480 78.302 5.48e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele01g0450 PK_Tyr_Ser-Thr 6.7e-23 CL0016