Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0430 ATGATGTGGGATGAGTGGGACAACAATATCCCAAAAGGTGACCAACCTGACCGAGATTCCTATCTCAACTTCGATTTCTTCTCTGCTCTCTCTAAGCCCAAGGACTATTATAAGATTCTGGAAGTAGATTATGATGCTACAGACGACGATATTCGTTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGACCAAGATGCCGCAACCTCACGATTCCAGGAGATAAATGAGGCTTATCAGGTATTGAGCGATCCTGCCAAAAGGAGAGAGTATGACGAAAATGGGATGCTTTATGTCTATGATTGCAATCTCATGGATTATCTTAATCGTTACAAGAGTCTTATATTGACATGTAATGGCCTTGGGATGAAGCAATTCATATGGTAA 402 0.4154 MMWDEWDNNIPKGDQPDRDSYLNFDFFSALSKPKDYYKILEVDYDATDDDIRSNYIRLALKWHPDKQKDQDAATSRFQEINEAYQVLSDPAKRREYDENGMLYVYDCNLMDYLNRYKSLILTCNGLGMKQFIW 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0430 133 SUPERFAMILY Chaperone J-domain 31 121 IPR036869 -
Lele01g0430 133 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Lele01g0430 133 FunFam Chaperone protein DNAj, putative 27 114 - -
Lele01g0430 133 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 133 - -
Lele01g0430 133 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Lele01g0430 133 SMART dnaj_3 34 92 IPR001623 -
Lele01g0430 133 Pfam DnaJ domain 35 97 IPR001623 -
Lele01g0430 133 PRINTS DnaJ domain signature 55 70 IPR001623 -
Lele01g0430 133 PRINTS DnaJ domain signature 92 111 IPR001623 -
Lele01g0430 133 PRINTS DnaJ domain signature 72 92 IPR001623 -
Lele01g0430 133 PRINTS DnaJ domain signature 37 55 IPR001623 -
Lele01g0430 133 Gene3D DnaJ domain 27 111 IPR036869 -
Lele01g0430 133 CDD DnaJ 35 89 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0430 Lele-ChrLele01 2519018 2521330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0430 28 97 C2H2 Transcription Factor Family AT1G74250 42.667 3.53e-12 60.5