Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0425 ATGGGTCTTCTTTCTTGCGATGCCAAATCTGTAATCGCCACCTGCCAATGCAATCCAATCCGCTTGAACGTAAACACAGCCTCAAAAGCAAGAAATTATAAGCAGAATAAGAAGCTGCCGGAGATCAGAAAGTTTGAGTATTTGGACCTGGTGGCAGCCACAGATGGGTTCTCGGCCGATAGCTTCCTGGGCAAAGGCAGTCACGGCAGCGTCTACAGAGCAAACCTCGACGACGGCAAGCTCATCGTTGCCGTCAAAACATCAAAGTTCAAAAGGCCATCCGCCATAAGCCTCCTTAATCACTGCTCCAAATGTACGGGTTGTTCCAAGTGTACCAGCCCCTCGGAGAACGAGATCGAGATCCTCTCCAGAGTACGAAGCTCTCGCCGCATCGTCAACCTCATAGGCTTCTGTACGGACTCCAATCTCAACAAACTGATCGTCGTCGAGTACATGCCCAACGGTTCCCTCCACAATCTCTTGCACTCCGCGCCCAATCCCCCCGGTTGGCCCCGACGTGTCCGGTTCGCATTGCAGGTGGCAGAAGCGGTTCGGACTCTCCACTCTTCCAACCCGCCTGTGATTCACCGGGACATCAAATCTTCAAACGTTTTAGTCGACAATGAGTGGAACGCAAGACTGGGCGATTTCGGCCTCGCTCTCAGGGGGCACAAATCGGATTTTCGCGGAGAGTACACACTGCCGGCGGGGACTTTAGGATATCTTGACCCATTCTATCTGGCGCCGGGGGATCTAACTGAGAAGAGCGACGTGTTCAGCTTCGGGATCTTGTTGCTGGAGATCATCAGCGGTAGGAACGCAATCGACGTGAAGTACAGCCCCCCATCGGTAGTGGAGTGGGCCGTGCCGTTAATAAAGCAGGATGAGTTTGAGGCAATCCGTGACCCGCGGTTAGGTGCGCCGTCAGACCCAACAGTGATAAAACAACTGGCGGTGTTGGCGGCGAGGTGCGTGAGGTGGAGGGCGGAGAAGCGGCCGCCCATGGCGGAGGTGGTGGAGAGTTTAACACAAGTGAGGAAGAGGATTCATGAGTGGCGAATATGGAGGAGCTTGAAGAGGCGAGTGGGGCGCAGGGAGAAAACAGAGAGGTTGAGTGGGTGGGAAGGGAATAATGAAATGAGGGAAGAAGTTGGGAGGGTAGTGAAGATGGGAAGCAGAAGGAACGGTAAGGTGTCGAGAGTGGGAGTTGCAGATCATGAGGCGAGTGAAGGTGGGAATGATCAAGTGGTGAGGCCGAAATCATTCGGGTGTGAAGGTGAGATGAAAATGTAG 1293 0.5375 MGLLSCDAKSVIATCQCNPIRLNVNTASKARNYKQNKKLPEIRKFEYLDLVAATDGFSADSFLGKGSHGSVYRANLDDGKLIVAVKTSKFKRPSAISLLNHCSKCTGCSKCTSPSENEIEILSRVRSSRRIVNLIGFCTDSNLNKLIVVEYMPNGSLHNLLHSAPNPPGWPRRVRFALQVAEAVRTLHSSNPPVIHRDIKSSNVLVDNEWNARLGDFGLALRGHKSDFRGEYTLPAGTLGYLDPFYLAPGDLTEKSDVFSFGILLLEIISGRNAIDVKYSPPSVVEWAVPLIKQDEFEAIRDPRLGAPSDPTVIKQLAVLAARCVRWRAEKRPPMAEVVESLTQVRKRIHEWRIWRSLKRRVGRREKTERLSGWEGNNEMREEVGRVVKMGSRRNGKVSRVGVADHEASEGGNDQVVRPKSFGCEGEMKM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0425 430 SMART serkin_6 57 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0425 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lele01g0425 430 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Lele01g0425 430 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Lele01g0425 430 PANTHER OS01G0253100 PROTEIN 33 348 IPR045271 -
Lele01g0425 430 Pfam Protein tyrosine and serine/threonine kinase 61 342 IPR001245 GO:0004672|GO:0006468
Lele01g0425 430 ProSiteProfiles Protein kinase domain profile. 57 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0425 430 MobiDBLite consensus disorder prediction 395 416 - -
Lele01g0425 430 Gene3D Transferase(Phosphotransferase) domain 1 152 359 - -
Lele01g0425 430 SUPERFAMILY Protein kinase-like (PK-like) 40 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0425 Lele-ChrLele01 2485869 2487161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0425 15 349 Receptor kinase-like Gene Family AT3G59420 40.517 1.24e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele01g0425 PK_Tyr_Ser-Thr 1.9e-36 CL0016