Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0418 ATGAAGAGTAACACCAAAAGTATCCCCAGACTGTTGAGACTTGACCATCAACATACCCGGGTTACTATGTCTCATGTTTCGGCACAGGCAATGCCTCCGCCGCCGCCAGCACCTTCCCAGTTCATGGAGGCACCGACGGTGACCTACGACAACAAGAGCGTGGCCATCATCATGGGCGTCGTGGTCATCGTATTCTTCGTATCGGGCTTCGTTTCGCTGTACAGTCGTCAGTGTGGGCACCGACGCCAATTCCGGGGCCACATCGACCTCACTTTTCCAATGGGTGCCGCGCGATCCACTTCCCGCGCGCAGGGGCGAGGTGTAAGCCCGGAGATCATACAGAGCTTCCCGACTTTCTTGTACTCGACGGTGAAATGGAGAGGGGCACTTGCATGCGCAGTGTGCCTGAACGAGTACAAAGACGACGAAACGCTGCAGTTAATTCCGAGATGCAACCACGTGTTCCATCCGGAATGCATCGAGGGCTGGCTGGCGTCTCACTACACTTGCCCACTGTGCCGGGCCAACCTGCTGGTCCCAGTAGCAGCACAGATTCAGAGCGAGGCCACGCCTCTGGTAGCCCTAGAAATTCCAGTTTCATCACAAGAAGAAGAAGTAGAAGAGAATGATAATGTAGGAGGTAGGAGGAATATAAGAGTGAATCGGAGCAGGACGGTGAAGGAGCCGGGGGGGCCAAGTCGGTCGAGGTCAACGGGATTGCTGATGGGGATACTGTTCGGGAGGTCTCGGTCAACGGGAGATGGCTACAGGAGGGAGAACTGGGAGAGATACACGCTGAGGCTGGAGGAAGTGAAGAGAGGGACGAGGCTGAAACGGACCAAAAGTTGCGTAGCATTTACGAGAATGAGCAGTGGCCGGAGCGGGTATCGAACAAGAAGCGTTGGCGGTAACTACTCGCAGTTACGATACGACTACGACCACTTCATCAAATACCATGCCTTCCCCATCAAGCCACCCCCTTCTTCATAA 990 0.5495 MKSNTKSIPRLLRLDHQHTRVTMSHVSAQAMPPPPPAPSQFMEAPTVTYDNKSVAIIMGVVVIVFFVSGFVSLYSRQCGHRRQFRGHIDLTFPMGAARSTSRAQGRGVSPEIIQSFPTFLYSTVKWRGALACAVCLNEYKDDETLQLIPRCNHVFHPECIEGWLASHYTCPLCRANLLVPVAAQIQSEATPLVALEIPVSSQEEEVEENDNVGGRRNIRVNRSRTVKEPGGPSRSRSTGLLMGILFGRSRSTGDGYRRENWERYTLRLEEVKRGTRLKRTKSCVAFTRMSSGRSGYRTRSVGGNYSQLRYDYDHFIKYHAFPIKPPPSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0418 329 SUPERFAMILY RING/U-box 110 180 - -
Lele01g0418 329 SMART ring_2 132 173 IPR001841 -
Lele01g0418 329 Pfam Ring finger domain 131 174 IPR001841 -
Lele01g0418 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 179 IPR013083 -
Lele01g0418 329 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Lele01g0418 329 FunFam E3 ubiquitin-protein ligase ATL6 96 180 - -
Lele01g0418 329 PANTHER RING FINGER DOMAIN-CONTAINING 32 186 - -
Lele01g0418 329 CDD RING-H2_EL5_like 132 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0418 Lele-ChrLele01 2445804 2446793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0418 53 295 Rapid Response to Elicitors AT3G05200 35.165 1.57e-40 144