Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0406 ATGGATAAAAGCTGCCAATCCTCTGCGGACTCCTCTACTACCACAGGAGCCACGCCCAGTAGTAGCAATGGCACCGTCACTTCTACTAATCTCAGGCACCTCAACAAGCTTTCTCACAAGATCTCCAAGCCCTCTCTTCGAAAACCCTCCTTTGATTCTTCTCTCCCTGAGTCCCAGCCCCACAAGCCCGATCACAGTCGGCCACAACCGGCGGCTCAGGCGCAAGCGCAGCAGCGGAATTTGCAGCATCCGCCTCCTGTCTACAACATCAACAAGAACGACTTCAGGGATGTAGTCCAGAAGCTCACTGGTTCGCCCGCTCACGAGCGCATCTCCACTCCGCCTCCTATTCAACAGCCCAATCCACCCAGCTCTCGCCTTCAGCGGATACGCCCTCCTCCCCTCGCACAGATTAGCAATCGCCCGCCTCCCTTCCTAGGCGGCGCTGTACCCCGTCCTCTACCACCTCCACTTAACGCCGCTTCGGCGTCGACTAGCAACCCCATTAACGCTGCTTATGTTGCTAATTTCTCTGACTTTGGGAGACCGCTTCCGCCGTTATCTCCTCTGCCACCTTTTCCGTCCGTCCACGCAGAATCTCCAGTATCCGCGTATATGCGCTATCTCCAGAATTCCACGTCCAACATGGATTGGAATCCCAAGCAGTTCTCTGGTTTTCCGCCCTTAGCTCCTTTAGTCTCGCCTCGCTGGAACAATATGGCTCCACAACAGCTTCAGCCAGATCCTCAAGGCCCTCCATCGCATCCTTCACAGACACCAGCAAATGCGCCGGCGCAACCGCAGTTTCAGATACCGTCTTCGCCAGCCCCTTTCGGATGCTTGAATTCGCCGAGGTCGCCACATCCTCTGCTTTCCCCAAGTCTTCTGTTTTCGCCTTCCTCGGGATTTGGGTTGCCGGTTTTGTACAGGGTTTTAGGTGGAGGGAATCAGCTTTGGTCTACTGGGCGATCAGAAATATTCCTACTGGATGGAAATAGCAGTCACCCCTATTCATTGGAAAACCATGACTTCTTTCTTGGGCACTAG 1047 0.5454 MDKSCQSSADSSTTTGATPSSSNGTVTSTNLRHLNKLSHKISKPSLRKPSFDSSLPESQPHKPDHSRPQPAAQAQAQQRNLQHPPPVYNINKNDFRDVVQKLTGSPAHERISTPPPIQQPNPPSSRLQRIRPPPLAQISNRPPPFLGGAVPRPLPPPLNAASASTSNPINAAYVANFSDFGRPLPPLSPLPPFPSVHAESPVSAYMRYLQNSTSNMDWNPKQFSGFPPLAPLVSPRWNNMAPQQLQPDPQGPPSHPSQTPANAPAQPQFQIPSSPAPFGCLNSPRSPHPLLSPSLLFSPSSGFGLPVLYRVLGGGNQLWSTGRSEIFLLDGNSSHPYSLENHDFFLGH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0406 348 MobiDBLite consensus disorder prediction 136 158 - -
Lele01g0406 348 Pfam VQ motif 83 108 IPR008889 -
Lele01g0406 348 MobiDBLite consensus disorder prediction 1 163 - -
Lele01g0406 348 MobiDBLite consensus disorder prediction 1 35 - -
Lele01g0406 348 MobiDBLite consensus disorder prediction 235 282 - -
Lele01g0406 348 PANTHER PROTEIN HAIKU1 24 301 IPR039612 -
Lele01g0406 348 MobiDBLite consensus disorder prediction 261 280 - -
Lele01g0406 348 MobiDBLite consensus disorder prediction 113 129 - -
Lele01g0406 348 MobiDBLite consensus disorder prediction 70 87 - -
Lele01g0406 348 MobiDBLite consensus disorder prediction 246 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0406 Lele-ChrLele01 2385240 2386842 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0406 01 2385240 2386842 Lele25g0376 25 2289409 2290153 CCT
Lele01g0406 01 2385240 2386842 Lele27g1707 27 22431456 22432519 CCT
Lele01g0406 01 2385240 2386842 Lele28g0386 28 2373710 2374784 CCT
Lele01g0406 01 2385240 2386842 Lele01g0406 01 2385240 2386842 ECH
Lele01g0406 01 2385240 2386842 Lele03g0418 03 2390217 2392480 hybridization
Lele01g0406 01 2385240 2386842 Lele04g0413 04 2451602 2452354 hybridization