Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0405 ATGGCGACAACTACCTCTCCTCGCGAAGAGAACGTCTACATGGCGAAGCTTGCCGAGCAGGCCGAGCGCTATGAAGAGATGGTCGAGTTCATGGAGAAAGTCTCCGCCGCCGTCGACAACGAAGAACTTACCGTCGAAGAGAGAAACCTCCTCTCTGTTGCCTACAAAAACGTCATCGGTGCCCGCCGTGCCTCCTGGCGTATCATTTCCTCCATCGAGCAAAAGGAGGAGAGCCGCGGTAACGAGGATCACGTCTCCATGATCCGTGATTACCGATCTAAGATAGAGACTGAGCTCTCCAACATCTGCGATGGGATCCTGAAGCTTCTTGATTCCCGTCTTATTCCATCCGCTTCTTCCGGTGATTCCAAGGTCTTTTACCTCAAAATGAAGGGTGATTATCACAGGTACCTCGCTGAGTTTAAGACTGGATCCGAGCGCAAGGATGCTGCTGAGAGCACGCTCACTGCGTACAACTCTGCCCAGGACATTGCAAAGGCCGAACTGCCTCCCACTCATCCGATTAGGCTTGGCCTGGCGCTGAACTTTTCGGTGTTCTACTATGAGATCTTTAACTCCCCAGATCGCGCTTGCAATCTTGCAAAACAGGCTTTTGACGAAGCAATTGCTGAATTGGATACTTTGGGGGAGGAGTCATACAAGGATAGCACTTTGATAATGCAACTTCTTCGTGATAACCTGACCCTTTGGACCTCCGACATGCAGGATGATGGTGCAGATGAAATTAAAGAGGCGGCACCTAAACAAGATGAAGAAGCCAATGCTTGCCTTACATCTCTCATGCGCCAGTACCTCAACTGTGTTTTATCCCCATTTTCCATTGCCGTTTTTGTAAATGCATGTGCTTAA 870 0.4977 MATTTSPREENVYMAKLAEQAERYEEMVEFMEKVSAAVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIETELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGSERKDAAESTLTAYNSAQDIAKAELPPTHPIRLGLALNFSVFYYEIFNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDEEANACLTSLMRQYLNCVLSPFSIAVFVNACA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0405 289 Coils Coil 14 34 - -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lele01g0405 289 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lele01g0405 289 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Lele01g0405 289 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lele01g0405 289 PIRSF 14-3-3 2 250 IPR000308 -
Lele01g0405 289 Pfam 14-3-3 protein 14 238 IPR023410 -
Lele01g0405 289 FunFam 14-3-3 protein epsilon 4 251 - -
Lele01g0405 289 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lele01g0405 289 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lele01g0405 289 SMART 1433_4 8 251 IPR023410 -
Lele01g0405 289 CDD 14-3-3_plant 8 244 - -
Lele01g0405 289 Gene3D - 1 252 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0405 Lele-ChrLele01 2380816 2383120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0405 6 259 14-3-3 family AT1G78300 91.373 2.28e-171 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0405 01 2380816 2383120 Lele25g0374 25 2273714 2281875 CCT
Lele01g0405 01 2380816 2383120 Lele26g0389 26 2345768 2350798 CCT
Lele01g0405 01 2380816 2383120 Lele28g0384 28 2360061 2365021 CCT
Lele01g0405 01 2380816 2383120 Lele01g0405 01 2380816 2383120 ECH
Lele01g0405 01 2380816 2383120 Lele03g0417 03 2386616 2388460 hybridization
Lele01g0405 01 2380816 2383120 Lele04g0411 04 2446930 2448750 hybridization