Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0401 ATGGCCGTCGCCTCCACCAACTCTCTCATTCCCAACAAAGCCTTTCTTCCTTCTCACTCCCCTCTTCCTTCCTCCAAAGTCCACCCATCTTCCCTCTCCAATAAGCCCAGGCCCTCCCCCCCTATCCTAGCGGCTCACTCCGCCGAGCCCGCCAAGAATCCCGTCGTCTCCGACAAGCCGCAAGCGACAGCCAGCACTGCTACGGCGATCACATCCCCTAATGTGGATCGGGGTAAATGGAGGCTCGAAAGTTGGAAATCTAAGAAGGCTCTGCAGCAGCCTGAATACCCCAATAAAGAGGAGCTCGAATCGGTTCTTCGGACTATCGAAGCGTTCCCCCCTATCGTGTTTGCCGGAGAGGCCAGGAGCCTGGAGGAACGTCTGGCCGAGGCTTCCATGGGGAATGCTTTTCTTCTGATGGGCGGAGATTGTGCCGAGAGCTTCAAGGAATTCAATGCCGTTAACATTCGTGACACCTTCAGAATTCTTCTTCAGATGAGTGTTGTTATGATGTTCGGAGGCCAAATGCCCGTCATTAAGGTGGGAAGGATGGCGGGACAGTTTGCAAAACCCAGATCGGATCCGTTAGAGGAGAAAAACGGCGTGAAACTACCGAGTTACCGAGGCGATAATATAAACGGAGATGCTTTTGATGAGAAGTCAAGAATTCCGGATCCACAAAGGATGATAAGAGCGTACTGTCAATCGGCAGCCACCCTTAATCTTCTTAGATCTTTTGCCACTGGAGGGTATGCTGCTATGCAAAGGGTCACTCAATGGAATTTGGACTTCACAGAGCACAACGAACAGGGAGACAGGTACCGAGAGCTCGCTCAACGAGTTGATGAGGCTCTGGGATTCATGGCTGCAGCTGGGCTGACTGTGGATCATCCTATAATGAAAACAACAGAGTTCTGGACTTCCCATGAATGCTTGTTATTGCCATACGAACAATCACTCGCTAGGTTGGATTCCACTTCCGGACTCTACTATGACTGCTCCGCCCATATGCTTTGGGTTGGGGAACGGACCAGGCAGTTGGATGGTGCCCATATTGAGTTTCTAAGGGGAGTTGCTAATCCTCTGGGGATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCGTTGAGATTTTGAATCCCCAAAACAAACCAGGAAGAATAACTGTGATCACAAGGATGGGAGCTGAAAATATGAGAGTGAAGCTTCCACATCTAATCAGGGCAGTTCGCAGAGCTGGGCAAATTGTCACATGGATCACCGATCCAATGCACGGAAACACCATCAAGGCTCCTTGTGGTCTTAAAACCCGCCCCTTTGATTCCATCAGGGCGGAGGTGAGAGCGTTCTTTGATGTGCACGAGCAAGAAGGAAGCCACGCGGGAGGAGTTCATCTGGAGATGACGGGTCAGAATGTGACGGAGTGCATCGGTGGGTCAAAGACGGTCACCTTTGACGACCTCAACTCCCGTTATCACACACACTGTGACCCTAGGCTCAATGCTTCTCAGTCTCTTGAGCTTGCCTTCATCATCGCCGAACGGCTCAGGAAGAGCAGGATGAGGTCGCAAAAGTTCCTCGGTTCCCAGTAG 1602 0.51 MAVASTNSLIPNKAFLPSHSPLPSSKVHPSSLSNKPRPSPPILAAHSAEPAKNPVVSDKPQATASTATAITSPNVDRGKWRLESWKSKKALQQPEYPNKEELESVLRTIEAFPPIVFAGEARSLEERLAEASMGNAFLLMGGDCAESFKEFNAVNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDPLEEKNGVKLPSYRGDNINGDAFDEKSRIPDPQRMIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFTEHNEQGDRYRELAQRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLARLDSTSGLYYDCSAHMLWVGERTRQLDGAHIEFLRGVANPLGIKVSDKMDPNELVKLVEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWITDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHAGGVHLEMTGQNVTECIGGSKTVTFDDLNSRYHTHCDPRLNASQSLELAFIIAERLRKSRMRSQKFLGSQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0401 533 Gene3D Aldolase class I 263 521 IPR013785 -
Lele01g0401 533 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 44 528 IPR002480 GO:0003849|GO:0009073
Lele01g0401 533 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 80 522 IPR002480 GO:0003849|GO:0009073
Lele01g0401 533 Pfam Class-II DAHP synthetase family 80 516 IPR002480 GO:0003849|GO:0009073
Lele01g0401 533 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 269 521 - -
Lele01g0401 533 MobiDBLite consensus disorder prediction 1 64 - -
Lele01g0401 533 SUPERFAMILY Aldolase 76 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0401 Lele-ChrLele01 2359184 2363065 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0401 01 2359184 2363065 Lele25g0373 25 2273032 2273647 CCT
Lele01g0401 01 2359184 2363065 Lele27g1712 27 22447859 22453014 CCT
Lele01g0401 01 2359184 2363065 Lele01g0401 01 2359184 2363065 ECH
Lele01g0401 01 2359184 2363065 Lele03g0412 03 2365211 2369117 hybridization
Lele01g0401 01 2359184 2363065 Lele04g0407 04 2425713 2430601 hybridization