Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0374 ATGCATAAAGCTCATCCTCCTATAGCTACAAAAAGGCCAAGTCACCATAAAAGGGGCCGGCGCGGATGCGTGGTTGTCGTCGGTATCAAATATGCTCTTGACAGAATGCAGCTGTCAGCTATTATCCTTCCGTGCTTTCTCCTGCTCTCTGAAGCGGTGGCCCCTGCCGAGTTGACTCAGTCGCCGCCTTTTGCCTGTGACTGGTCCAATCCTGCTACCAGATCCTACCCATTCTGTAACCCCAAGCTCAGCGTGTCTCGAAGGGCCCAAGACCTGGTGTCCCAACTCTCATTGGACGAGAAGCTAGCTCAACTAGTGAACGACGCACCTCCCATTCCTCGACTCGGAATCCCGGAATACCAATGGTGGAATGAGGCTTTACACGGAGTCGCCAACGTCGGACGTGGCATCCGATTCAATGGCTCCATTACTTCTGCTACTAGCTTCCCTCAAGTCATCCTCTCCGCCGCCACCTTCGACTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAACGGAAGCGAGAGCAATCTATAATGCAGGGCAAGCCACGGGCATGACATTTTGGGCTCCAAACATTAACATCTTCAGGGATCCAAGATGGGGGAGAGGGCAAGAGACAGCCGGCGAAGACCCGCAGGTTACTTCCAAGTACGCTGTGTCGTATGTGAGGGGAGTACAGGGTGATTCCTTCCAGGGAGGCAAACTCAGTGGTCATCTTCAAGCTTCCGCTTGCTGCAAGCATTTCACCGCCTATGATTTGGACAACTGGAAGGGTGTCAGTCGTTTCGACTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCGGAGTTGCGTAGAGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAACCGAGTGAATGGGGTTCCAAACTGCGCAGATTACAATCTCCTAACTAAAACCGCCAGAAAACAGTGGGGTTTTCATGGGTATATCACTTCCGATTGTGGAGCAGTCTCACTCCTTCGTGATCATCAAGGATATGCTAAATCAGCGGAAGATGCTGTGGCCGATGTCCTTCGGGCTGGAATGGACGTAGAGTGTGGTGATTACTTGACGAAGTATGCTAAATCAGCAGTGGTGCAGAAAAAATTACCAATATCTCAAGTAGATCGTGCACTTCACAACCTGTTCTCTATCAGAATAAGGCTGGGTCTATTCGATGGGAATCCAGCCAAGCTGCCCTTCGGTGCGATCGGTCCTAATCAAGTGTGTTCAAAAGATCACCAGTATTTGGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCACTCCCTAAAACAAAACCCACAATTTCCCTTGCACTCATAGGTCCTAACGCCAATGCTTCCCCTTTAACTCTCCTTGGAAACTATGCAGGCCCTCCCTGTAAACTCGTGACGCCATTGCAGGCCTTTCAGCACTACGTTAAGAACACCATTTATCACCCTGGTTGTGATGATGGGGCCAAGTGTTCTTTGGCTCAGATTGGCAAAGCCGTGGCAATCGCCTCGAAGGTGGATTACGTGGTGCTGATGATGGGATTGGATCAAAGTCAAGAGAGAGAAGATCGTGATCGGGTTCACCTGGACTTACCCGGCAAGCAGCTGGAACTCATACACAGCGTTGCTAAAGCTTCCAAGAGGCCAGTCATCCTGGTGATCTTTTCTGGAGGCCCTGTTGATATTTCTTCTGCCAAGTATAACAACAAAGTTGGAGGCATCTTATGGGCCGGTTATCCCGGAGAAGCTGGAGGAATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCAATGACTTGGTACCCAAAAGATTTCATAAGAGTGCCGATGACAGACATGAGGATGCGAGCTGATCCATCTTCTTGGTATCCCGGAAGGACTTACCGGTTTTACACGGGTCCAAAGGTGTACGAGTTCGCCTATGGCTTAAGCTACTCTAAATATTCGCATGAGTTCGTCTCTGTCACGCAAAACAAGCTTCACTTGAATCAATCGTCGGCTTATTTGATAGTTGAGAATTCGGAGACCATTCGTATCAAATCAGTATCAGAGATGGGTGCAAAATTGTGCCATAGCATTTCGGTGTCAGTGAAGGTGGGAGTTAAAAATGATGGAAGTATGGCGGGGAAGCATTCAGTGTTGCTATTTGCAAGGCATGCAAAACAGAGAAGTGGAAATGCGATCAAACAGTTGGTGGGTTTTGAGAGTGTGATGTTAGAGGCAGGGGAAAGGGCAGGAGTTGGATTTGAGATAAGCCCTTGCGAGCACCTTAGCAGAGCAAGCGAGGGTGGCTCCAAAGTCATTGAAGAAGGGTCCCACCTGTTGATTGTTGGGGATGAAGAGTATCCAATTGATGTCATTTTCTGA 2439 0.4924 MHKAHPPIATKRPSHHKRGRRGCVVVVGIKYALDRMQLSAIILPCFLLLSEAVAPAELTQSPPFACDWSNPATRSYPFCNPKLSVSRRAQDLVSQLSLDEKLAQLVNDAPPIPRLGIPEYQWWNEALHGVANVGRGIRFNGSITSATSFPQVILSAATFDSHLWYRIGQAIGTEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPQVTSKYAVSYVRGVQGDSFQGGKLSGHLQASACCKHFTAYDLDNWKGVSRFDFDARVTLQDLADTYQPPFRSCVEQGRASGIMCAYNRVNGVPNCADYNLLTKTARKQWGFHGYITSDCGAVSLLRDHQGYAKSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPISQVDRALHNLFSIRIRLGLFDGNPAKLPFGAIGPNQVCSKDHQYLALEAARNGIVLLKNSARLLPLPKTKPTISLALIGPNANASPLTLLGNYAGPPCKLVTPLQAFQHYVKNTIYHPGCDDGAKCSLAQIGKAVAIASKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPVDISSAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPMTWYPKDFIRVPMTDMRMRADPSSWYPGRTYRFYTGPKVYEFAYGLSYSKYSHEFVSVTQNKLHLNQSSAYLIVENSETIRIKSVSEMGAKLCHSISVSVKVGVKNDGSMAGKHSVLLFARHAKQRSGNAIKQLVGFESVMLEAGERAGVGFEISPCEHLSRASEGGSKVIEEGSHLLIVGDEEYPIDVIF 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0374 812 FunFam probable beta-D-xylosidase 7 88 409 - -
Lele01g0374 812 FunFam probable beta-D-xylosidase 2 422 670 - -
Lele01g0374 812 PRINTS Glycosyl hydrolase family 3 signature 243 259 IPR001764 GO:0004553|GO:0005975
Lele01g0374 812 PRINTS Glycosyl hydrolase family 3 signature 149 168 IPR001764 GO:0004553|GO:0005975
Lele01g0374 812 PRINTS Glycosyl hydrolase family 3 signature 317 335 IPR001764 GO:0004553|GO:0005975
Lele01g0374 812 Pfam Glycosyl hydrolase family 3 C-terminal domain 437 669 IPR002772 GO:0004553|GO:0005975
Lele01g0374 812 Gene3D Immunoglobulins 698 810 IPR013783 -
Lele01g0374 812 PANTHER SUGAR HYDROLASE-RELATED 56 808 IPR044993 GO:0009044|GO:0045493
Lele01g0374 812 Pfam Glycosyl hydrolase family 3 N terminal domain 143 393 IPR001764 GO:0004553|GO:0005975
Lele01g0374 812 Gene3D - 422 670 IPR036881 GO:0004553|GO:0005975
Lele01g0374 812 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 437 672 IPR036881 GO:0004553|GO:0005975
Lele01g0374 812 SMART Fn3_like_2 735 805 IPR026891 -
Lele01g0374 812 SUPERFAMILY (Trans)glycosidases 76 435 IPR017853 -
Lele01g0374 812 Gene3D - 88 410 IPR036962 GO:0004553|GO:0005975
Lele01g0374 812 Pfam Fibronectin type III-like domain 736 803 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0374 Lele-ChrLele01 2170894 2175718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0374 62 810 Glycoside Hydrolase AT1G78060 65.691 0.0 1016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0374 01 2170894 2175718 Lele25g0342 25 2089314 2094486 CCT
Lele01g0374 01 2170894 2175718 Lele26g0360 26 2171766 2176224 CCT
Lele01g0374 01 2170894 2175718 Lele27g1739 27 22646434 22651326 CCT
Lele01g0374 01 2170894 2175718 Lele28g0358 28 2192375 2196859 CCT
Lele01g0374 01 2170894 2175718 Lele01g0374 01 2170894 2175718 ECH
Lele01g0374 01 2170894 2175718 Lele03g0380 03 2192833 2203776 hybridization
Lele01g0374 01 2170894 2175718 Lele04g0377 04 2228733 2239314 hybridization