Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g0372 | ATGGCTGCTAAAGTCTGTCACCAGGCTATTGGTACTCTTCAGTCAGAGTCGCTTCATAAAAATTCTAAAAATCACCAAAATCTTCAGAAGAACTCAATAAGATTGATAGCAAAGGATTTTAGCAGCTGCAACAGCTTGTCAAGGAGAGCTGATCAGAGGAATTGTTGCATAATCCGATCCTCAGCTTCTCAAACATCGGTGGTTGATCCAGTGTTATCCCCTTCAAGAAGCAGCACAAGTGACAGTTCCAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACATGGTGAATCATTATGGAATGAAAAGAATTTATTCACAGGCTGCGTAGATGTCCCACTAAGTAAGAAGGGCATAGATGAGGCGATTGAAGCTGGCAAAAGGATCAGTAGCATTCCTGTTGATGTCATATTTACATCTGCTCTGATTCGTGCACAAATGACAGCAATGCTTGCCATGACCCAGCACCGTCGAAGAAAGGTGCCTATCATCATACACAATGAGAGTGAACAAGCAAGAGCATGGAGCCAAGTATTTAGCGAAGATACAAAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGAGAGCTACAGGGTCTTAACAAGCAGGAAACAGCTGACAGATATGGGAAAGAACAAGTCCATGAATGGCGCCGAAGCTATGATACACCTCCTCCAAGTGGTGAGAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTCAGAGAGCAGATTGAGCCCCAGCTTTCATCTGGAAAAAATGTTATGATTGCTGCTCATGGGAATTCATTGAGATCCATTATCATGTATCTTGACAAACTAACTTCCCAAGAGGTCATTAGCTTGGAATTATCCACTGGAATTCCCATGCTTTATATTTTCAAAGAAGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCAACTGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCATTACAGACAAAAATTGGATGAAATGTACTAG | 1023 | 0.4184 | MAAKVCHQAIGTLQSESLHKNSKNHQNLQKNSIRLIAKDFSSCNSLSRRADQRNCCIIRSSASQTSVVDPVLSPSRSSTSDSSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIIHNESEQARAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPSGESLEMCAERAVAYFREQIEPQLSSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRRLAHYRQKLDEMY | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g0372 | 340 | PANTHER | PHOSPHOGLYCERATE MUTASE | 79 | 328 | IPR005952 | GO:0004619|GO:0006096|GO:0016868 | |
Lele01g0372 | 340 | SMART | PGAM_5 | 90 | 276 | IPR013078 | - | |
Lele01g0372 | 340 | Hamap | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. | 88 | 315 | IPR005952 | GO:0004619|GO:0006096|GO:0016868 | |
Lele01g0372 | 340 | Pfam | Histidine phosphatase superfamily (branch 1) | 186 | 294 | IPR013078 | - | |
Lele01g0372 | 340 | Pfam | Histidine phosphatase superfamily (branch 1) | 91 | 167 | IPR013078 | - | |
Lele01g0372 | 340 | SUPERFAMILY | Phosphoglycerate mutase-like | 91 | 307 | IPR029033 | - | |
Lele01g0372 | 340 | ProSitePatterns | Phosphoglycerate mutase family phosphohistidine signature. | 93 | 102 | IPR001345 | GO:0003824 | |
Lele01g0372 | 340 | CDD | HP_PGM_like | 91 | 310 | IPR013078 | - | |
Lele01g0372 | 340 | Gene3D | - | 80 | 313 | IPR029033 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g0372 | Lele-ChrLele01 | 2161731 | 2164339 | Dispersed/Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele26g0340 | 26 | 2031169 | 2032701 | Lele01g0372 | 01 | 2161731 | 2164339 | CCT | |
Lele27g1760 | 27 | 22768952 | 22771602 | Lele01g0372 | 01 | 2161731 | 2164339 | CCT | |
Lele01g0372 | 01 | 2161731 | 2164339 | Lele01g0372 | 01 | 2161731 | 2164339 | ECH | |
Lele01g0372 | 01 | 2161731 | 2164339 | Lele03g0378 | 03 | 2181580 | 2184913 | hybridization | |
Lele01g0372 | 01 | 2161731 | 2164339 | Lele04g0375 | 04 | 2219180 | 2222284 | hybridization |