Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0361 ATGGAAAAGAAAGAGTTAGTAGAGACAATCGAATCAAATTTCCCTGCTGCTGAAAAGCTGGAAGATGTTCCCATTATACACAATGAAAAGGCCAAACCGCCAGAAGAGGTAAAAAGTCAAAATATTGGCAGCAACGATCTCGCGTCAGACAACAGACAAGATGATATATCTGACAAGACAAATGAGATGGCATATGAGCATGAGAGTAATGTCACGAAAACAGAAACTGGAGATCAATCCTTCAATAATGTTGGACAAAATTTCTCCAATGATAATGTTGATGGCAGCAAAGGGTCTGAGTTTACCAGTCAAGGAGGAATTGTAGATGTAATTTCTGGACAACATGAATTTGCCAAAGAGACGAGCGAGAGTGGGAACGTGGAATCCACACAAATGAATCAGAAGACAGATGAAATTCCAAGTGAGGACAATAATCTAGAGCCCGTGTTTGACGGAACAGAGATTTCTGGTATGGAAGCTAACAGAAGCACGGATAATAGTTCTTTAGACTTGAATGCTGATTCAGATACTCATGGTGTGATTGAGAAGGCTGTGGCACTTAAAAATTTTGTTAGGGAGAGAAGTGCCGTAGCAGTCTCTACTGTGCTACGTCGCCTTTCTGGAAAAGGTGATGAAGGTTCCATGGGCAACTTTGATGATGAAAGTAAGAATGCTTCTGAATCCTCAAATGTGGACTCTACTGAGAAAAAATCTTGGAACCCCCTAAATTATATTAGGATGTCATTCGAAGCTGAGTTGGGAGGCAAAAATGAATGTCTGGAACCAACAACCGGAGGTCCTCAATATCCCATAGTCATGAAAGGAAGGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAAAAGTTAGGCTATTTTTGTATAGGAAACGACTTAGGTATGTTGAAATCAATATTGACGTGTACCCCAGTAGAAAGCAGGAGCTTGACAAGATTTCTGGATCTACTTCTGTTCCCAAGGTGTTTTTCAATGAAATACTTATTGGAGGTTTGAATGAGCTAAAGGCCTTGGATGAATCTGGTAAGCTCAATGAGAAGATTGAATTTCTCATTACTGAAGCGCCGTCAATTGAAGCCCCGTTACCGCCTCTTTCTGGAGAGGGTGACGAGTCTAGTTGTGGAGCTCTCGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAATTTATTGTTGTGAAAGATCGATTTTACAAAATGCGGAGGTTCACGAACTGTTTTCTTGGCTCAGAAGCGGTGGACTTCTTATCAGAAGATCAATACTTGGAAAGACAGGAGGCTGTTGAATTTGCACGAAATCTTGCGGGCAAATTCTTCTTCCACCATGTTCTTGATGAGAATCTATTTGAGGATAGTAACCACTTGTATCGTTTTTTGGATGATGACCCGGTTGTGGCTTCTCAATGTCACAATATTTCGAGGGGCATAACCACTGTGAAGCCAAAGTCTATAATAGAAATCGCATCAAGGCTAAGGTTTTTGTCTCATGCAATATTTGAAGCCTATGTTTCTGAAGATGGACATCATGTTAATTACAGAAGTCTCCATGGAAGCGAGGAGTTTGCGAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATATTGGATTTGTCTAGAGAAGATAAGCTAGCTTTCTTTATCAATCTTTATAATATGATGGCCATTCATGCAATCTTAGAATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGAAAATTGTTTGGAGACTTCAAATATGTGATTGGTGGGTCCACTTACTCACTTTCAACCATTCAAAATGGCATTTTAAGGGGAAACCAGCGGCCACCGTACAATCTTGTGAAGCCATTTGGTGCAAAAGATAAACGTACGAGGGTGGCTCTTCCTTACCCTGAACCTCTTGTCCATTTTGCTTTAGTATGCGGTACCAGATCTGGGCCCGCCCTTAGATGCTATTCTCCTCGAGATATTGATAAAGAATTAATGGACTCAGCTCACAATTTCTTGAGAAGTGGAGGACTTCTCATTGATTTGAATACGAAGGTTGCATATGCTAGCAAGATCCTTAAGTGGTTTAGTATAGATTTTGGCAAGAACGATGCAGAGGTACTGAGGCACGTGTCAAACTACTTAGACCCAACTGACGCAGCAGTATTGTTGGATCTGCTCGCCACTTCTGAATTGAAGGTGATTCATGTCCCTTATGATTGGGGTTTAAACTACTAA 2232 0.4099 MEKKELVETIESNFPAAEKLEDVPIIHNEKAKPPEEVKSQNIGSNDLASDNRQDDISDKTNEMAYEHESNVTKTETGDQSFNNVGQNFSNDNVDGSKGSEFTSQGGIVDVISGQHEFAKETSESGNVESTQMNQKTDEIPSEDNNLEPVFDGTEISGMEANRSTDNSSLDLNADSDTHGVIEKAVALKNFVRERSAVAVSTVLRRLSGKGDEGSMGNFDDESKNASESSNVDSTEKKSWNPLNYIRMSFEAELGGKNECLEPTTGGPQYPIVMKGRIILYTRLGCQESKKVRLFLYRKRLRYVEINIDVYPSRKQELDKISGSTSVPKVFFNEILIGGLNELKALDESGKLNEKIEFLITEAPSIEAPLPPLSGEGDESSCGALDEMALIVSKMKEFIVVKDRFYKMRRFTNCFLGSEAVDFLSEDQYLERQEAVEFARNLAGKFFFHHVLDENLFEDSNHLYRFLDDDPVVASQCHNISRGITTVKPKSIIEIASRLRFLSHAIFEAYVSEDGHHVNYRSLHGSEEFARYLRIVEELQRVEILDLSREDKLAFFINLYNMMAIHAILEWGHPAGALERRKLFGDFKYVIGGSTYSLSTIQNGILRGNQRPPYNLVKPFGAKDKRTRVALPYPEPLVHFALVCGTRSGPALRCYSPRDIDKELMDSAHNFLRSGGLLIDLNTKVAYASKILKWFSIDFGKNDAEVLRHVSNYLDPTDAAVLLDLLATSELKVIHVPYDWGLNY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0361 743 Gene3D Glutaredoxin 272 357 - -
Lele01g0361 743 ProSiteProfiles DEP domain profile. 394 467 IPR000591 GO:0035556
Lele01g0361 743 CDD DEP 390 464 - -
Lele01g0361 743 Pfam Glutaredoxin 277 333 IPR002109 -
Lele01g0361 743 MobiDBLite consensus disorder prediction 120 139 - -
Lele01g0361 743 Gene3D - 386 519 IPR036388 -
Lele01g0361 743 MobiDBLite consensus disorder prediction 209 236 - -
Lele01g0361 743 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 399 465 IPR000591 GO:0035556
Lele01g0361 743 ProSiteProfiles Glutaredoxin domain profile. 265 366 - -
Lele01g0361 743 SUPERFAMILY "Winged helix" DNA-binding domain 394 475 IPR036390 -
Lele01g0361 743 SUPERFAMILY Thioredoxin-like 271 355 IPR036249 -
Lele01g0361 743 MobiDBLite consensus disorder prediction 51 73 - -
Lele01g0361 743 SMART DEP_3 394 467 IPR000591 GO:0035556
Lele01g0361 743 MobiDBLite consensus disorder prediction 22 36 - -
Lele01g0361 743 MobiDBLite consensus disorder prediction 120 145 - -
Lele01g0361 743 Pfam Protein of unknown function, DUF547 545 671 IPR006869 -
Lele01g0361 743 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 29 742 - -
Lele01g0361 743 MobiDBLite consensus disorder prediction 219 236 - -
Lele01g0361 743 MobiDBLite consensus disorder prediction 1 90 - -
Lele01g0361 743 MobiDBLite consensus disorder prediction 74 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0361 Lele-ChrLele01 2093193 2096854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0319 26 1906138 1916298 Lele01g0361 01 2093193 2096854 CCT
Lele28g0320 28 1930775 1939915 Lele01g0361 01 2093193 2096854 CCT
Lele01g0361 01 2093193 2096854 Lele01g0361 01 2093193 2096854 ECH
Lele01g0361 01 2093193 2096854 Lele03g0366 03 2105659 2109345 hybridization
Lele01g0361 01 2093193 2096854 Lele04g0361 04 2143867 2147477 hybridization