Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0357 ATGAGTTCTCCATCAACTCAACTTGTCATCTCGAAAAGGATGGGCATATATGAGCCATTCCAGCAAGTTAGCATGTGGGCAGACAACTTCAAAGTTGAAAATAGCCTAAATTCAGGTCCTTCCCAGATATTCATGGTGAACCCTACCACAGAGCCCAAGGCTGAATATATTCCTCACGAATCAACGGGACACTCAGGAGATGATCAAGAGACCAACACTGCTGTTAGCAAGGTGCTAAGACGCCTGGCACAAAATCGCGAAGCAGCTCGAAAGAGTCGTCAAAGGAAGAAGGCTTATGTCCAACAATTAGAGACAAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAAAAAGCAGGGTACGCATATGGGCGGAGCATTAGATGCTAATTACATAGGATCACCCGGAACAATCAACCCAGGGATTGCAACTTTTGAGATGGAATATAGTCATTGGGTTGAAGAGCAACACAGACAAAATGCAGAACTTAGAAACGTATTGCAAACAGAGTCATCTGACGTGCAGCTTCATCTGCTGGTTGAGAGTGGCTTGAATCATTACTCGAATCTCTTCAGGATGAAAGGTGACGCTGCAAAAGCTGATGTCTTCTACTTAATCTCCGGAGTGTGGAAGGCATCGGTCGAACGCCTCTTCCTCTGGATCGGGGGATCCCGCCCATCTCAGCTTCTTAACATCATCGTGCCACAGGTGGAGGATTTGACGGATCAGCAGAAAGCGAGTTGCACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCACTTTCACAAGGACTGGATAAACTACAGCAGAATCTGGTCTTCAAAATGGGCGCCAATGAATTGGACATAGGAAGCTTTGGGTTTCAGATGACTTCTGCCATGGAGACAATTGAAGCACTGGAGGGTTTTGTAAGCCAGGCAGACCACCTTCGACAACAAACGTTGCAGCATATGTCTCGGATCCTGACACCCCGGCAAGCAGCTCAAGGCTTGCTGATCTTAGGCGAATACTTTCAGCGTCTTCGTGCTCTGAGTTCTCTTTGGTCAGCTCGTCCATGCGACCCTGCATTCCAAACTTGA 1095 0.4721 MSSPSTQLVISKRMGIYEPFQQVSMWADNFKVENSLNSGPSQIFMVNPTTEPKAEYIPHESTGHSGDDQETNTAVSKVLRRLAQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKAKKQGTHMGGALDANYIGSPGTINPGIATFEMEYSHWVEEQHRQNAELRNVLQTESSDVQLHLLVESGLNHYSNLFRMKGDAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVEDLTDQQKASCTKLRQSSQQAEDALSQGLDKLQQNLVFKMGANELDIGSFGFQMTSAMETIEALEGFVSQADHLRQQTLQHMSRILTPRQAAQGLLILGEYFQRLRALSSLWSARPCDPAFQT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0357 364 Pfam bZIP transcription factor 77 110 IPR004827 GO:0003700|GO:0006355
Lele01g0357 364 ProSiteProfiles DOG1 domain profile. 146 356 IPR025422 GO:0006351|GO:0043565
Lele01g0357 364 SUPERFAMILY Leucine zipper domain 77 110 IPR046347 GO:0003700|GO:0006355
Lele01g0357 364 FunFam BZIP family transcription factor 76 125 - -
Lele01g0357 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele01g0357 364 Pfam Seed dormancy control 165 238 IPR025422 GO:0006351|GO:0043565
Lele01g0357 364 Gene3D - 76 129 - -
Lele01g0357 364 PANTHER TRANSCRIPTION FACTOR TGA9 1 358 - -
Lele01g0357 364 SMART brlzneu 73 133 IPR004827 GO:0003700|GO:0006355
Lele01g0357 364 Coils Coil 96 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0357 Lele-ChrLele01 2072861 2075100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0357 2 360 Calmodulin-binding Proteins AT1G77920 55.348 1.50e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele01g0357 DOG1 7.3e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0357 01 2072861 2075100 Lele01g0357 01 2072861 2075100 ECH
Lele01g0357 01 2072861 2075100 Lele03g0363 03 2087623 2089875 hybridization
Lele01g0357 01 2072861 2075100 Lele04g0359 04 2121719 2123990 hybridization