Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0349 ATGCGTCCTTCAAGGTCACGTCAAGTTCATCCCACCCCGGTTCAGGGGGGGCGTCTCGACCCTAAAATCTGGCGAGCATGCGCCGGCGGATCCTTTCGAATCGCTCCTCTCCATTCTAGGGTTTATTACTTCCCTCAGGGCCATATCGAGCATGCCTCGTCGGCTCCTCAATACCTTAACCCTCTAATCTTTTCCAGGCCCCTCATTCCCTGTCGAGTTTCCGCTATTGAATTTCTTGCTGACCCCGCCACTGACGAGGTATTTGCCAAGCTTTCACTCCTTCCTTTGGGTGATGGCAACTCTGATCACTTTGCCGATTCCTTGGAAGCGTCGGACGATGACAAGGTTGTGTCGTTTGCGAAGGTTCTGACGCGTTCTGACGCGAACAATGGTGGTGGATTCTCTGTTCCTAGGGACTGTGCTGACTCCATCTTTCCGCCTCTGAACTTCCAGGGCGACCGACCCATCCAGACATTGTACGTGACGGATGTTCATGGTAAGGTCTGGGAGTTTCGCCACATTTATCGGGGCACACCGAGGCGCCACTTGCTCACTACTGGATGGAGTAAGTTTGTCAATAGCAAGAAGTTGGTTGCTGGTGATTCAGTGGTTTTCATGAAGAATTCTGCAGGGATGGTTTTCGTCGGGATTCGCAGAGCTTTCCGATTTGCTAAATTAACTACCGTCGATTGCTCCCTGTTCTCTTCCCAGCCAGGTGGGGTGAGAAATAAACCTGAGGGGGAGCAGCAGACAGAGGGCTATTTAGGTTCCAGAGGGAAAGAAGGATTTTCAAGGGACGGGAAGGGTAGATTGTCGGCTAAGGAAGTTGCTGATGCTGCAGATTTGGCAGCGCAAAACATTCCGTTTGAGGTTGTTTATTATCCAAGGGTGGGCTGGACGGACTTTGTGGTGAAGGTGGAAGCTGTGGAGAAAGCTTGGAATGTCGCATGGACTGCCGGAATGAGAGTTAAAGTGCCAATGGAGACACAGGATTCGTCCAGGATCACATGGTTTCAAGGGACAGTATCATCTACATCTGCTACGGATAATGGGCTTTGGCGGGGTTCTCCATGGCGTATGCTTCAGGTTATGTGGGATGAACCTGAAGTCTTGCATAATGCAAAACGAGTGAGCCCCTGGGAGGTTGAACTTGTTTCCTCTGTTCTTCCCCCTAATACAGTATTCCCTCCTGCAAAAAGGTTTAGAGCTGCTCAGTATTGTGGGGTCGCAACCGATAGGGAGGGTAACCCCTTCTTTACTATGACAGGTTTGACCAATTCAACAATGGGGCACTTGAACCAATCATTGTTGAATTACAGTACTGTTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTATCGAGTCTCTCCAATTTTGAAATTGGTAATTCTCATCTGTATATTGGTAATACATTTGGAAACGTGGTACCCAAGAAGAAAACTTTTATGTCAACAGAGCCAAATATTGACAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCAGAGTAGTTTGCAGGGCTCGGGCACAGAATTTGCTGGGACACGAGGCTGCAACTTAACAAAACAGGGTGCAAGTTCAATTCAGCTATTCGGTAAGCTCATTCAATTGGAACAGCCCGTTGAAAATGATGAGGGTAGTAATGGTTGCAATGAGACTGAAGGCGTTGACTAA 1686 0.4875 MRPSRSRQVHPTPVQGGRLDPKIWRACAGGSFRIAPLHSRVYYFPQGHIEHASSAPQYLNPLIFSRPLIPCRVSAIEFLADPATDEVFAKLSLLPLGDGNSDHFADSLEASDDDKVVSFAKVLTRSDANNGGGFSVPRDCADSIFPPLNFQGDRPIQTLYVTDVHGKVWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNSAGMVFVGIRRAFRFAKLTTVDCSLFSSQPGGVRNKPEGEQQTEGYLGSRGKEGFSRDGKGRLSAKEVADAADLAAQNIPFEVVYYPRVGWTDFVVKVEAVEKAWNVAWTAGMRVKVPMETQDSSRITWFQGTVSSTSATDNGLWRGSPWRMLQVMWDEPEVLHNAKRVSPWEVELVSSVLPPNTVFPPAKRFRAAQYCGVATDREGNPFFTMTGLTNSTMGHLNQSLLNYSTVVPAGMQGARQDLSSVSSLSNFEIGNSHLYIGNTFGNVVPKKKTFMSTEPNIDSSQSNSLSPESQSSLQGSGTEFAGTRGCNLTKQGASSIQLFGKLIQLEQPVENDEGSNGCNETEGVD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0349 561 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele01g0349 561 MobiDBLite consensus disorder prediction 238 267 - -
Lele01g0349 561 SUPERFAMILY DNA-binding pseudobarrel domain 106 227 IPR015300 -
Lele01g0349 561 Pfam B3 DNA binding domain 119 219 IPR003340 GO:0003677
Lele01g0349 561 Gene3D - 116 221 IPR015300 -
Lele01g0349 561 MobiDBLite consensus disorder prediction 488 516 - -
Lele01g0349 561 Gene3D - 317 389 - -
Lele01g0349 561 SMART B3_2 119 220 IPR003340 GO:0003677
Lele01g0349 561 FunFam Auxin response factor 117 221 - -
Lele01g0349 561 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele01g0349 561 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 545 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele01g0349 561 CDD B3_DNA 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0349 Lele-ChrLele01 2046598 2050256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0349 18 559 B3 DNA Binding Superfamily AT1G77850 48.182 2.53e-166 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele01g0349 B3 6.8e-23 CL0405