Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0346 ATGACTGGGGACCGATGTCACCGGAGGAGGAAGATGAAGGGCAGAGGTGCGCAAGGAGGTTGCGGAACCCAGGACGGGCCTTGCCCTGTTTCGAGGGTTCTGGTTAAATCCCCGGGGACCCAACCGGGAAATTCTGATAACTCCACTGCACTTGAAATTGATTACTACTCGCAGGCCATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGATGTTGCGGAAGAGACTTCTACGTCGACGGTGCCTACACTGCCCAGTGGGTGGGCAAGCTTCTTAAACCGCTATGCTGAAAGTCGTAGGCGCCACATGAAGTCCCATTCTGGTGCGGACAAGAAATCGTCTAGAGCATGTGAAAAGTCGCGAAGTTCAAGCATATGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGTCAGACATAGACGCCTTGTTGGAGGCATCCTCCTCTTTTAGTTTAGCTGCTCGCAAGTTTTTTTCTGTTCCACCAGTTGGAAATGCTCCAAGGTCAAATGCAGCTAGTTACGAGGATTACAAGGAGACTGATGGAAACCTAAACAGCGAGGATGTGAAGAATGAGGACCGAGTCACGGAGAGTAACAGCGTTGCTGCTGGAGTTTTGGCTCAGGATGACAAGGGTCATGATGCTTTTGATTCGTCTAGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGATTTCTCTGATTCCTGAGCGCCCTTCAAAGAGGAGGAAGCTTCTGGGTGGTGAATCTGGGTTGGATAAATTTTTAATGACCAGTCCTTGTGATGGAGATTCTCCTCTGTGTCACTGTTGCTGCAGGGGAGACACCTGCAGAGAGTCTAATCAATTAATTGTCTGCGTTATTTGTAAAGTTGCAGTTCATAAGAAGTGCTATGGTGTGCAAGATGATGTAGACGAGTCTTGGTTGTGCTCTTGGTGCAAGCAAAAGGGTGACATTGATGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCAAAGACATGTGGAGAGTGCTGGGTCTGCGCAGTTTGCTCACTTGTTTTGTTGTTTATGGATGCCTGAGGTTTATATAGAGGATCTGGAGAAGATGGAGCCTGTTATGAATGTAGGAGGAATCCAGGAAACCCGGAAAAAATTAGTCTGTAATATTTGCAAGGTGAAATTTGGCGCATGTATTCGATGTAGCCATGCATACACTTCAAGTCCTCGTTTAATAGCTTATAACTCCTTGCTGCTGGGTGGTGTTACAGGATCCTGCAGGTCTTCTTTCCATCCTTTATGTGCCAGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAGAAAAAGGTCATGACAATATTGAGTTGCGGGCCTTTTGTTCCAAACACTCGGATATACAAGAGAACAGCACCATCTTGCCTTCAGGTGGCTCTGTAGCTTTTGGTAGTGATTTGTCTTTTCCGGCAGACACACAGCACAATTTGAAAATTGGATGCCAAAATGGAGACAATTTTGGGATAGTTTATGATGGTAATCCTGATAAATTAAGTCATGGTGAACCACCGGATGGAATGTTGTCTGTTTGTCAGTTAAATGCTCATGAAACATCAGAATGTAGTGGTTTGCCACAACTAAATAATACTGCAGTGGTGGGAAGGACTGATGAAATTGCCAATGCATCTGACTCCCTTGGTTTTGCCGTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATCTTAAAGATGTAGCTTTGGAGATTGGCATTTCTTCTGATAGATTAAACGCAAATATTAATGATTCTTGCATGGCCCCTGATGTGCATCTCAAAATATTCAATTGGCTAAAAGCTCATGTATATACTAATGTGTTTCAGAAAAGTTTGAAAGTCAAATTCAAGCCTGCCAACTTATCCAAGGGTGAAAATGGAATCACTGATTGTCCTGATACTCTACAGATATCGGACTCTGAGTTGCCAGATCCTGTTGCTGTTAAGTCAGTGCCATCAAGGAGAAGAACAACCGGTAATATCAGGATTCGGAAAGATAACAAAGCAATATGTTCATCTGGTGTGGTGTCTAGTGAGAACGGAATGCCAATGGACAAGGCCAAAGGAGGTCAATCCGAACATGAAAATTCTGAAAGATCAAACGAAGCGGCCATTCTTGATGCAACTGAGATGAAACTAACCAAGTCTGACGACGCTTCTTTTGATTCTCAAGGGAATGCAGATAAACCTGGCAAAATAATCTTATCTGGAGGTGTTTTGGAAGAAAAGCTTGCTAATGCTTTTTCTGATCACCACCATTCTTATTGTTCTGCTGCAGATTTACCTACTTCGGTTTTCATGAACATTGAAGGAAACTCTTGGTACATTCACCCATACATCCATAAAAAGTTATTGCAGATTCATGCTGGGGTCCTTTCAGAGGATGTTACATGTGAAAGGGAGGAAGAAAATTTTTATTTGGATGGATTCTCAGGGCCTAGGGGTGGCTCTAGTTACCAAAATCCAGAAGTAACTTGCAGTGACATATGTAAGGCTGATAAAGTAAATACGAAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCAAAAGATGAAGTGGAGGGTGAACTAATATATCTTCAGCATAGATTATTGCAGAATACAGTTGCAAGGAAGAAGTTTGCTGATAATTTAATCTCTAGTATAGCTAAGAGTCTTCCGCAGGAGATTGATGCTACACACCAGCAAAGATGGGATGCTGTACTTGTTAATCAGTATGTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTGGTGGCTGCAACTGCAGCATCATCATCATCATCTAGGGTTTCTTCATTGCGGAAGGATGCCTTTGAAGAATCTGCACTGCCGGAGAATTTTTTAAAGCACACTTTCAGTCGAAGGACTGGTGTTTGCTCTCAGCCAATGCCACGGGCCATAGAAACACTTTCCAGAGTAACTATGGTTAGGACTTCATTAGAAAAACATTCAGATTGTGGTCTACAAGATGCAGATTTTTCTAAGGAGCATCCCAAACTATGTGATATCTGTAGACGATCTGAAACTATATTGAACCCAATTCTCGTCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGAACTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTATTGTGAATTATGTGAACATTTATCATGTAGAATGTCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTACTGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTTGAGTTGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTTTGTTGAAAGGAGTTGACACATGTTGCATCTGCTGCCGCAAGCATGGTGTATGCTTAAAGTGTAGCTATGGCCATTGTCAGACCACATTTCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCAAGTGGCAAGCTGCAGCACAGGGTTTACTGTGAAAAGCATGGTTCAGAGCAGAAGGCAAAGGCTGAAAGCCAAAAACATGGAATTGAAGAATTAAAAAGTATCAAGCAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTATATGTTCACATGACATACTTGCATTCAAAAGAGATCATGTTGCTAGGTCTGTCTCGGTGCATAGCCCTTTCGTTCTTCCTGATTGTAGCTCAGAATCAGCTACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGGGAAGCTGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTTTCTGCTAAGCATCGAGTCAGAGTTGCTGTAACCATGGACAGTGACCCAAAGTTGGATGATGACTGTTCAACTTCACGAAGCCATTATAATCATAAGATTCCTGAGAGGGTGCAGTTTTCTGGCAAGCAGATTCCTCACAGAGCTTCCATCATATCACGGAGTATTTCGGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGTTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCCGCTGATTGCTTGTCTAATGATAAGCGATCTAAGCAAGATGTATTTACTCGTGAACCAGCGGAGCACAACGGTATCGGACATTTGAGGAGAATGGCAAAATGGATCTGGAGATCAGCGACAGGGCTCCGGCCGGCACGAAGTTGTGCTCTGCTCTGGAGGGGAAAGTCTAACATTGCTTATTCCTTGTCTAGGCCGTGCGAGCCCCGTTTAAACTGGGATCAGGATCCTCTGCAGTCGGGCAGGAAAATGGGCTCGCTGGAGACACCGACAACCACGGAAAACGGTTCCGCAACTGTCGCCGGTAACGGAAAAGCTCCCGCTGCCGATGGGGAACCCTTGCAGCCAACGGGGGACGTCGAAATGGTGGCAGAGAAGCCGCTGGAATCCGATCAGTCAAAGAAGCGGAGGATGGCTTTGCTTCCCCTGGAGGTTGGTACTAGGGTCTTGTGCCGGTGGAGGGACGGAAAGTTTCACCCTGTAAAGGTCATTGAACGCCGCAAGGTGCCAGCCGGCGACCCCAATGATTATGAGTACTACGTCCATTACACTGAGTTTAATAGGAGACTTGATGAGTGGGTGAAGCTAGAACAACTTGACCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTAGAGGATAAGGTAACAAGCTTGAAGATGACACGCCACCAAAAGCGGAAGATTGATGAGACACATGTAGAGGAGGGGCATGAGGAACTTGATGCTGCTAGCTTGCGAGAGCATGAGGAATTTACTAAAGTGAAAAATATAGCCACTATTGAGCTTGGAAGATATGAGATTGAGACTTGGTACTTCTCCCCCTTCCCACCAGAATACAATGACTGTGTGAAGCTGTACTTTTGTGAATTTTGCCTCAATTTCATGAAGCGCAAAGAGCAGCTTCAGAGGCATATGAGGAAGTGTGACCTTAAGCATCCTCCTGGTGATGAGATATACAGAAGTGGCACTCTGTCAATGTTTGAGGTCGATGGCAAAAAGAACAAGATATATGGGCAGAATCTATGTTATCTGGCAAAGTTGTTTCTTGATCACAAGACCCTCTATTATGATGTAGACTTGTTTCTGTTCTATGTTTTGTGCGAATGTGATGATCGAGGATGCCATATGGTTGGCTATTTCTCCAAGGAAAAACATTCAGAGGAATCTTACAATTTGGCGTGCATCCTCACCCTTCCACCCTACCAGAGGAAAGGCTATGGGAAATTTCTAATAGCATTCTCATATGAACTTTCTAAGAAGGAGGGTAAAGTCGGCACACCTGAAAGACCCCTTTCTGACCTTGGGCTGCTGAGCTACCGAGGATATTGGACCAGGGTTCTTTTGGACATCTTGAAGAAGCATAAGGGTAATATATCTATCAAGGAGCTGAGTGATATGACAGCCATCAAAGCTGAAGATATATTGACTACCCTTCAGAGCCTGGAATTGATCCAATACAGGAAAGGACAGCATGTTATATGTGCAGATCCAAAAGTTTTGGATCGCCATCTCAAAGCTGCTGGGAGAGGCGGTCTGGACGTTGATGTTGGCAAATTGATCTGGACTCCTTATAAAGAACAAGGATGA 5844 0.441 MTGDRCHRRRKMKGRGAQGGCGTQDGPCPVSRVLVKSPGTQPGNSDNSTALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSGWASFLNRYAESRRRHMKSHSGADKKSSRACEKSRSSSIWVETEDYFRDLKLSDIDALLEASSSFSLAARKFFSVPPVGNAPRSNAASYEDYKETDGNLNSEDVKNEDRVTESNSVAAGVLAQDDKGHDAFDSSSSLEWLLGCRNKISLIPERPSKRRKLLGGESGLDKFLMTSPCDGDSPLCHCCCRGDTCRESNQLIVCVICKVAVHKKCYGVQDDVDESWLCSWCKQKGDIDEMVHPCVLCPKKGGALKPVQRHVESAGSAQFAHLFCCLWMPEVYIEDLEKMEPVMNVGGIQETRKKLVCNICKVKFGACIRCSHAYTSSPRLIAYNSLLLGGVTGSCRSSFHPLCAREASHRMEVWAEKGHDNIELRAFCSKHSDIQENSTILPSGGSVAFGSDLSFPADTQHNLKIGCQNGDNFGIVYDGNPDKLSHGEPPDGMLSVCQLNAHETSECSGLPQLNNTAVVGRTDEIANASDSLGFAVVLKKLIDRGKVDLKDVALEIGISSDRLNANINDSCMAPDVHLKIFNWLKAHVYTNVFQKSLKVKFKPANLSKGENGITDCPDTLQISDSELPDPVAVKSVPSRRRTTGNIRIRKDNKAICSSGVVSSENGMPMDKAKGGQSEHENSERSNEAAILDATEMKLTKSDDASFDSQGNADKPGKIILSGGVLEEKLANAFSDHHHSYCSAADLPTSVFMNIEGNSWYIHPYIHKKLLQIHAGVLSEDVTCEREEENFYLDGFSGPRGGSSYQNPEVTCSDICKADKVNTKQLVMARNMGLLESCPKDEVEGELIYLQHRLLQNTVARKKFADNLISSIAKSLPQEIDATHQQRWDAVLVNQYVRDLREAKKQGRKERRHKEAQAVLVAATAASSSSSRVSSLRKDAFEESALPENFLKHTFSRRTGVCSQPMPRAIETLSRVTMVRTSLEKHSDCGLQDADFSKEHPKLCDICRRSETILNPILVCSGCKVAVHLNCYRSVKEFTGPWYCELCEHLSCRMSGQPSINSWEKPYFVAECGICGGTTGAYRKSSDGHWVHAFCAEWVFELTFRRGQVNAVEGMETLLKGVDTCCICCRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAASGKLQHRVYCEKHGSEQKAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKRELVICSHDILAFKRDHVARSVSVHSPFVLPDCSSESATTSLKGNTEGYRSCREAVQRSDDVTVDSSVSAKHRVRVAVTMDSDPKLDDDCSTSRSHYNHKIPERVQFSGKQIPHRASIISRSISDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTREPAEHNGIGHLRRMAKWIWRSATGLRPARSCALLWRGKSNIAYSLSRPCEPRLNWDQDPLQSGRKMGSLETPTTTENGSATVAGNGKAPAADGEPLQPTGDVEMVAEKPLESDQSKKRRMALLPLEVGTRVLCRWRDGKFHPVKVIERRKVPAGDPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKIYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVGKLIWTPYKEQG 1947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0346 1947 Coils Coil 1229 1249 - -
Lele01g0346 1947 CDD NAT_SF 1783 1841 - -
Lele01g0346 1947 FunFam Histone acetyltransferase 1850 1929 - -
Lele01g0346 1947 ProSiteProfiles Zinc finger PHD-type profile. 1032 1081 IPR019787 -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 1489 1538 - -
Lele01g0346 1947 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1672 1943 IPR016181 -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 180 194 - -
Lele01g0346 1947 FunFam Histone acetyltransferase 1551 1671 - -
Lele01g0346 1947 ProSiteProfiles Zinc finger PHD-type profile. 265 316 IPR019787 -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 1500 1518 - -
Lele01g0346 1947 PANTHER HISTONE ACETYLTRANSFERASE 1566 1943 - -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 168 194 - -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 1 15 - -
Lele01g0346 1947 Pfam PHD-finger 1046 1079 - -
Lele01g0346 1947 Pfam PHD-finger 281 314 - -
Lele01g0346 1947 Gene3D - 1850 1930 IPR036388 -
Lele01g0346 1947 SUPERFAMILY FYVE/PHD zinc finger 1025 1084 IPR011011 -
Lele01g0346 1947 FunFam Histone acetyltransferase 1730 1858 - -
Lele01g0346 1947 SUPERFAMILY Chromo domain-like 1553 1672 IPR016197 -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 1 49 - -
Lele01g0346 1947 Pfam RNA binding activity-knot of a chromodomain 1561 1619 IPR025995 -
Lele01g0346 1947 CDD CBD_MOF_like 1564 1633 - -
Lele01g0346 1947 Gene3D - 1672 1728 - -
Lele01g0346 1947 Pfam MYST family zinc finger domain 1673 1727 IPR040706 -
Lele01g0346 1947 SMART PHD_3 1034 1079 IPR001965 -
Lele01g0346 1947 SMART PHD_3 269 314 IPR001965 -
Lele01g0346 1947 SMART PHD_3 1156 1209 IPR001965 -
Lele01g0346 1947 SMART PHD_3 388 464 IPR001965 -
Lele01g0346 1947 MobiDBLite consensus disorder prediction 691 717 - -
Lele01g0346 1947 ProSiteProfiles Extended PHD (ePHD) domain profile. 1100 1209 IPR034732 -
Lele01g0346 1947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 466 IPR013083 -
Lele01g0346 1947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1100 1211 IPR013083 -
Lele01g0346 1947 Pfam PHD-zinc-finger like domain 325 463 - -
Lele01g0346 1947 Pfam PHD-zinc-finger like domain 1102 1208 - -
Lele01g0346 1947 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 1671 1942 IPR002717 GO:0004402|GO:0006355|GO:0016573
Lele01g0346 1947 SMART chromo_7 1575 1634 IPR000953 -
Lele01g0346 1947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1022 1082 IPR013083 -
Lele01g0346 1947 SUPERFAMILY FYVE/PHD zinc finger 255 315 IPR011011 -
Lele01g0346 1947 FunFam Histone acetyltransferase 1670 1727 - -
Lele01g0346 1947 Gene3D - 1730 1942 - -
Lele01g0346 1947 Gene3D - 1550 1671 - -
Lele01g0346 1947 CDD ePHD 1103 1208 - -
Lele01g0346 1947 Coils Coil 928 948 - -
Lele01g0346 1947 Pfam MOZ/SAS family 1732 1909 IPR002717 GO:0004402|GO:0006355|GO:0016573
Lele01g0346 1947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 322 IPR013083 -
Lele01g0346 1947 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 464 IPR034732 -
Lele01g0346 1947 ProSitePatterns Zinc finger PHD-type signature. 1035 1078 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0346 Lele-ChrLele01 2015926 2033493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0346 1505 1946 C2H2 Transcription Factor Family AT5G64610 85.973 0.0 796