Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0343 ATGCATCACCTACCTCGTTTTTTAGGTCATAGAAAGCAAGCTAAGGGGATGGACCACAAGAAGATCCCAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATACTTTGAGTATGATGCTGCGTCATCTTCATCGTCGCTGGACGACTCCTCTGGTTCTCTATATACTCGATCGATGGAGTTTTATGACAGAACCAGCTTCCGAATTGAGGGAGTTGAGGGCGAGTTTGATCTTATATGCAGGAGTTTGGGGCTGTCCGGACCAGAAGACTTCGCTATCCCGGCAGCGGCGTGGGAGGCTATGAAGGTTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAAAGATTTGGAAAGTCGGGAGAAGGAGGAGCTGAAAGATAAAGAGTCGAATCAATTAGTGCGCGAATCAGGTGACAATTGTGAAGAAAGGGTTACGATTAGAGATGTGAATGAATCAGCTAAAGACGACCCTGCTGAGACAAGTGGGAGCGGAGGTATCAAGGGTCTCCGTCCGCCGATGATTAGGCCACCGCCAGGGATGAGGCTTCCAGTTATTGATGACATGTGTTCTACCTGGGATATTCTGAGAGGTTTTGCTCCTCAAGGTGAAGGACAGTCATTGGAAAAGTACGAGGAGCCGAACTTTTCTGATGATGACCAAGAACGACGGAGAGAAACGGAGAGAGCAGAAGCGCAGAAACAAGAAGAAGCAGGAGTACGTGAGGCGGACGGGTTTACTCCGAAGTTAGAAGAGGATACTACATCAAGGCTTGCGGATGTTGTTGCTGAGTTTTCGGGATCGTGTTCGTTTACTACGTCAAACGAAGATGATACTTCTAGCTCCTCCACGGGTCCAAGGTCTACCAATATATCCCCTAATGTGAGATTTAGACGAATTATTGCGAACTGGCAAAAGGGCGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTCTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTCTCACTGCTCGATCAAGGGAGTCAGGGACAGCAGAGTGTCTTTCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTCCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTACATCTTTCTTGAGCTTGTTACTAAAGGTTCCCTTGCAAGCCTCTACAGGAGGTACAACCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGACCAAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTAGCGGATTTTGGATTGGCAAAGGCAACCAAATTCAACGATGTTAAATCATGCAAGGGGACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGTAAGAATCAAGGTTATGGGCTTCCAGCTGATATATGGAGTCTTGGTTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTCATCTTGAGGGGATGCAAGCATTGTATAGAATTGGAAAAGGTGAGCGCCCGCCTGTTCCTGATTCTCTTTCAAAAGATGCAAGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGAGCGTCCCACTTCTACTAGGCTGTTAAACCATCCATTTGTCCAAAGGCCACTTTCCATTTCGTCTGGCTCTGCATCCCCTTATATTCCTGGCAGAAGGAATTAA 1740 0.4615 MHHLPRFLGHRKQAKGMDHKKIPRKPKLERRNAAKYFEYDAASSSSSLDDSSGSLYTRSMEFYDRTSFRIEGVEGEFDLICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLKDLESREKEELKDKESNQLVRESGDNCEERVTIRDVNESAKDDPAETSGSGGIKGLRPPMIRPPPGMRLPVIDDMCSTWDILRGFAPQGEGQSLEKYEEPNFSDDDQERRRETERAEAQKQEEAGVREADGFTPKLEEDTTSRLADVVAEFSGSCSFTTSNEDDTSSSSTGPRSTNISPNVRFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQGSQGQQSVFQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSHLEGMQALYRIGKGERPPVPDSLSKDARDFILQCLQVNPDERPTSTRLLNHPFVQRPLSISSGSASPYIPGRRN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0343 579 MobiDBLite consensus disorder prediction 206 255 - -
Lele01g0343 579 ProSiteProfiles Protein kinase domain profile. 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0343 579 MobiDBLite consensus disorder prediction 271 292 - -
Lele01g0343 579 MobiDBLite consensus disorder prediction 1 28 - -
Lele01g0343 579 Gene3D Transferase(Phosphotransferase) domain 1 304 571 - -
Lele01g0343 579 MobiDBLite consensus disorder prediction 213 255 - -
Lele01g0343 579 SMART serkin_6 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0343 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lele01g0343 579 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 66 572 - -
Lele01g0343 579 MobiDBLite consensus disorder prediction 123 158 - -
Lele01g0343 579 FunFam Mitogen-activated protein kinase 1, putative, expressed 304 571 - -
Lele01g0343 579 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Lele01g0343 579 SUPERFAMILY Protein kinase-like (PK-like) 280 563 IPR011009 -
Lele01g0343 579 Pfam Protein kinase domain 307 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0343 579 MobiDBLite consensus disorder prediction 123 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0343 Lele-ChrLele01 1995217 2001278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0343 4 563 MAP Kinase Kinase Kinase AT4G08500 52.104 1.28e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele01g0343 Pkinase 1.8e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0343 01 1995217 2001278 Lele01g0343 01 1995217 2001278 ECH
Lele01g0343 01 1995217 2001278 Lele03g0351 03 1989201 1995193 hybridization
Lele01g0343 01 1995217 2001278 Lele04g0347 04 2041742 2047635 hybridization