Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0327 ATGACGAGCTTCCACTGCTCAAGCTCTGCCCTCACCATGATGCCTGTGGCCATGGCTATGGACTTCGTCCATGAACTTGAATTCTCCGGCTCCAGCACCACCACCACACCTGACGAAGACGATTATGCCGCCGCTTGCCATTGGAACCACTGGTCCCCCCTCGTCAACTGGGAAGCCTTCTCCGGCGCCCAAGACGACTTCCACGGCCTCATAGACTCCATCATGGATGACTCTGCCGGGATCCTTAGCACCCAACACGGAACGGAAGTAGTTTACAACTCGCCCAACTCCACCTCGACGGAAGTAACCGTGGTTGACGAAGAAGCAAGCGACGGTGTTGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTAATGGCAGCCGCCGAAGCCTTCGCCGGCGCCAATAAGAGCCATGATCTGGCTCGAGTGATATTGATTCGCCTCAAGGAGTTGGTTTCCCCCATCGACGGCTCCAACATGGAGAGGTTGGCGTCGTATTTTACGGAAGCCTTACATGGTTTGCTTGAAGACGCAGGGGGCACACAGAACAATAACCGCCACAAGCATTTCACTGGCACTGGACCCCACCGTGAGGACCACCCTCCATTGGATGTGCTGGCCGCATTTCAGCTCCTTCAGGACATGTCCCCCTACGTCAAGTTCGGGCACTTCACCGCAAACCAGGCCATCCTGGAGGCCGTGGCCACCGAGAGGCGAGTCCACGTCATCGACTACGACATCATGGAAGGCATCCAGTGGGCATCCTTAATTCAGGCTCTCGCCCCTAAAACGGACGGCCTACTCGGCCCACACCTCAGGATCACGGCATTGTCCAGAAGCGGAGGCGGAAGAAGATCGATCATCACCGTGCAAGAGACGGGGCGTCGTTTGACGGCGTTCGCGGCTTCCGTGGGTCAGCCGTTCTCGTTTCATCAATGCAGGTTGGACTCGGCCGAAACATTTCGACCTTCAGGTCTGAAGCTGGTTCGAGGAGAGGCCCTGGTGTTCAACTGCATGCTGCATCTTCCCCACCTCACTCACCGGGCACCCGAGTCGGTCGCATCGTTCCTGAATGGAGCGAAGACGTTGAACCCGAGACTAGTGACATTGGTTGAGGAGGAGAGTGGACTTTCCACCGGAGAAGGGGGGTTCGTGAGTCGGTTCATGGACTGTTTGCACCATTACTCTTCGCTTTACGATTCACTGGAGACGGGGATACCCATGCAAAGCGGGGCGAGGGCGCTGGTGGAGCGGGTGTATTTGGGGCCCCGAATAGCGGGGTCGGTGGCGAGAACATACAGAAACGGGGGTGAAGAGGAGAGAGCTGGACCGTGGGGGGAGTGCTTGGGGGAGATGGGCTACAAGGGAGTGGCCATAAGCTTCGCCAACCAATGCCAAGCCAATCTCTTATTGGGACTCTTCAACGATGGCTATAAGGCAGAGGTGTTGGGTTGCAATAAGTTGGTGTTGAGTTGGAGATCTAGGCGTTTTCTTTCCGCCTCTCTTTGGACATCTTCTTCCCCGATCGCTCCTTCTCAATCATTGTTCTAG 1554 0.5644 MTSFHCSSSALTMMPVAMAMDFVHELEFSGSSTTTTPDEDDYAAACHWNHWSPLVNWEAFSGAQDDFHGLIDSIMDDSAGILSTQHGTEVVYNSPNSTSTEVTVVDEEASDGVEDFKGLRLVHLLMAAAEAFAGANKSHDLARVILIRLKELVSPIDGSNMERLASYFTEALHGLLEDAGGTQNNNRHKHFTGTGPHREDHPPLDVLAAFQLLQDMSPYVKFGHFTANQAILEAVATERRVHVIDYDIMEGIQWASLIQALAPKTDGLLGPHLRITALSRSGGGRRSIITVQETGRRLTAFAASVGQPFSFHQCRLDSAETFRPSGLKLVRGEALVFNCMLHLPHLTHRAPESVASFLNGAKTLNPRLVTLVEEESGLSTGEGGFVSRFMDCLHHYSSLYDSLETGIPMQSGARALVERVYLGPRIAGSVARTYRNGGEEERAGPWGECLGEMGYKGVAISFANQCQANLLLGLFNDGYKAEVLGCNKLVLSWRSRRFLSASLWTSSSPIAPSQSLF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0327 517 ProSiteProfiles GRAS family profile. 112 505 IPR005202 -
Lele01g0327 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 96 495 IPR005202 -
Lele01g0327 517 Pfam GRAS domain family 121 505 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0327 Lele-ChrLele01 1878829 1880382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0327 93 506 GRAS Transcription Factor Family AT5G41920 32.938 1.44e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele01g0327 GRAS 7.7e-96 CL0063