LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele01g0319	ATGGGGATGAGCGAGGTGATGCGCAAGGTGAAGCCATACTTGGCTATCATCTCCCTTCAATTTGGCTACTCGGGCATGTATATCATCACCATGGTTTCTTTCAAGCATGGTATGAGCCACTGGGTTCTCTCTGTCTACCGTCATATCGTCGCCCTCGTCATCATTGCTCCTTTTGCTCTTGTCCTTGAAAGAAAAATAAGGCCTAAGATGACTCTCCCAATCTTCCTCAGGATGGTGGCGCTTGGTTTCCTAGAGCCGGTGCTGGATCAGAATCTATACAATATGGGGATGAAGGCGACCTCAACAACTTTCGCATCTGCGATTGTTAATGTCCTCCCAGCTATTACTTTTCTGATGGCACTCGCGTTCAGGTTAGAGAGTGTGAACCTGAGGAAACTACCCAGCTGGGCCAAGATAATAGGAACCGTAATAACAGTGTCAGGTGCAATGGTGATGACTTTGTACAAAGGCGCAGCCTTTCAGATCATAAAGTCAAAAGCTATGAGCCATCACGATTCTGCCTCCACCGAACCCTCCGACCAGCACTGGGTCCTCGGCACCGTTTACCTTATTGCAAGTTGCGGTGGCTGGGCTGCCTTCTTCATTTTGCAATCATTCACTTTGAATATGTACCCGGCAGAGCTCTCTCTCACGGCTTGGATTTGCGTGACGGGAATTGTTGAGGGTACCATTGCAACCTTTATAATGGAAAGGGACTTGAGCGTCTGGGTCATAGGCTGGGACTCAAGGCTCCTCGCTTGTGTTTATTCTGGTGTGGTGTGCTCTGGCATGGCTTACTATGTACAAGGGGTTGTCACCAGAGAACGTGGACCAGTGTTTTTGACTTCTTTCAGCCCATTAATCATGATTATTACTGCAGGTTTAGGTTCCTTTGTGCTAGCCGAGCAAGTCCACGTGGGAAGCATAATCGGAGCTATACTCATCGTGTTCGGGCTTTACTCTGTGGTGTGGGGGAAAAGCAAAGACGTTAAAAGCACAAGCGATGACACGGTGAAAGGAGAAGGACAGGAGTTGCCAATAAAGAACGGTACAATGTCAGGATCAGACATTTTTGACAAGATTGAGGTCAGTGTTCCTGCTGACAAGTCGAAGCGTTCGGGGAAGAACAATAATGTCCCACCAACATCACCCCCACCAAGATCATGA	1167	0.4816	MGMSEVMRKVKPYLAIISLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVALVIIAPFALVLERKIRPKMTLPIFLRMVALGFLEPVLDQNLYNMGMKATSTTFASAIVNVLPAITFLMALAFRLESVNLRKLPSWAKIIGTVITVSGAMVMTLYKGAAFQIIKSKAMSHHDSASTEPSDQHWVLGTVYLIASCGGWAAFFILQSFTLNMYPAELSLTAWICVTGIVEGTIATFIMERDLSVWVIGWDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFLTSFSPLIMIITAGLGSFVLAEQVHVGSIIGAILIVFGLYSVVWGKSKDVKSTSDDTVKGEGQELPIKNGTMSGSDIFDKIEVSVPADKSKRSGKNNNVPPTSPPPRS	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele01g0319	388	Pfam	EamA-like transporter family	186	323	IPR000620	GO:0016020
	Lele01g0319	388	Pfam	EamA-like transporter family	24	153	IPR000620	GO:0016020
	Lele01g0319	388	MobiDBLite	consensus disorder prediction	330	388	-	-
	Lele01g0319	388	PANTHER	WAT1-RELATED PROTEIN	11	330	IPR030184	GO:0016020\|GO:0022857
	Lele01g0319	388	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	46	156	-	-
	Lele01g0319	388	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	247	327	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele01g0319	Lele-ChrLele01	1829177	1831644	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele01g0319	7	349	Nodulin-like Gene Family	AT4G08300	66.185	1.30e-165	467