Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0314 ATGGTTCAGTCTACCTTGTTCCCTCAGAAAACTCAACAGTCCGATGACAGAGCTGATGATCAACAAGTGGAAGAAGAGGCACACTGTTGTGCGAATGAGAACAGGAAGGGAAAGTCCAAACTTAAAGTCACTCCTCGAACCAAGAATTCCAAGCAAAGGGAGAAGCAGCTGCAGATTACTATGCCAGAGAATATGGGCACACCCAAGCGTCGGAATGTTCGCCGGAAGTTGATTCAGTCGACATTGTCCCCACAGAAAACCCAAGAGTCCGATAGCAGAGACAGTCTCTTTGATGGTCAACAACAGAAAGAAGAGACACACTGTTGCGTTAATGAGAATGAGAAGGGAAATTCCAATCGAAAAGTTACTCCCCGGTCGAAGAATTCCAAGCAAAAGGAGAGGCAGCTGCAGGATACCACCCCAAAGAAACGGTCACCCAAAGGGGTTAATGGGGCCAGTTCACAGCAAATGTTGACCAATGTGGCACAGATTAATATGACGGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCCGCTGAGGTTGGGAAGACACCTCAGGATGCAGCTGAATCTAATCGCAGTTTATGCGCAGCAAGGAGGAAGGATGAGGAAGTACTTGCTTGTGCCGCTATTCATGTATTTGAAAATAATAAGGATGTCAATGATACATCATTGCCAGACTGGAAAAACTGGACGTTTTTGGGGCAGACTGCCAAAGCAAATTGTGATCCAGAAAGTTCATTTTCCTCTGTTTTTGAGGGTTCTAGTGAACCCTTGAATATTGATAAGCTTATCAGTACTTTTCATTCCTCTGGTGTTATAGTATCTCAAAATGCCCTATCTTGTTCAGATCAACATTCTATAGAATCTGAACATCCTCAATTAGAAAACTCAGCTGCACCTGCTGGCAGGCAAACAAGTCTTCAATCACCAGAAGCGAAACTGGACATTAAAGCCAATACTGCGCAAGCTGGTATTTGCAGAAAGTCAGATCTTGAACCACCAAGTAGATTTCTTCAAGAAAGCATGAGGTCGTATTACCATAGTGGTGGATATAAGGCTGAGGGAACCTCGTGGACATACAAGTACAAGCCAACAAAAGCCTTTGAGGTATGTGGTAATGACGAGTCTGTGAAATTTTTGCGTGACTGGTTACAACTCTGGCATGGAAGACGTTATCAAAGCAGGAAGGATGCCTTGTACATGGATAAAGGTGATATGCAAGATGATGATGACGACGATGATGATTATGACTGTTCTCATTCTGACTATGATTCAGAAGACATGACCGAGGAGGACTCCCTGGAGAATGTTCTCTTAATTACTGGACCAACTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCACAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATACATCAGACTATCGAAATGGGACTACTGTCAGGCAGCACTTTGGAGATGCTCTGGGATCACTTGGGTTCAAAAGGTTATTGGAACACACCAATAGTTCACCAATGAAGAAAAAGAGGAAGTTATCCTCAGGCCAGGCTTTGCCTAGTAACAAAGCATCTGATGAGTTAAATGGAGAGGTAACTGGACCAATAGTCATATCTGATGATGAAGCTGTCTGCCCTGATGCAACATCTTGGATGTTACCTGGCCAGAGAAATTTAATTGGATATGATAAAGCCCAAAAATTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCTGAGACAGCCAAGGGGCCAATTATATTAACCTGCAATAGCAATAATCCTGCTCTGCCAAATAATTTGAAAAGACTACATGTTTCTTTCTCATTGCCATCCACAAAAGAGTTGCTGTCCCACTTGTACATGGTTTGCGTCACAGAAGGAGTCAACATTCATCCTCTTATGCTGGAGAAATTTATACAATCTTGTGATGGTGATATCCGCAAAACCATGATGCATCTTCAGTTCTGGTTCCAGGATAGAAAAGCACAGCAATTGTATGGCTCTCTTCCATTTGACCTTGACGTTGGCCATCAGATACTGCCTAAGATGATGCCCTGGGATTTTCCCTCTCAGTTATCTGAACTAATTGAGAGTGAAGTTAACAAGGTAATCACCACAATGGAAGGAAACTCTAGTTTGCAGGGTTTAGTTGAAGAACAGCTTGACATAAATGAAAAGCAAAGCGATTCAGATGTGCAGCAGATGGGAACTGATTATATAGAGGCCAAGAAAGAAGAAATGCTTGAGAGGAATGGATCTGTTACTGACTACAGCAAATTGGAGGCTCAATTTCATGCACTTTCTGAGATTTCAAATTCTTCTTACGCCCCAGTTGTTCCTTGCAATCGAAAGATTCAAAGGAAGCTTGTAGTGATGTCCTCTGGTTCTGAGGATGAGGATTTAAATAATGGCCATCCTCTAGACATGTGTGATGATGCTAACAATGGACCATCTCTTGAAGACAACAGTGATTCTCCATCTAAATTTCCAATGAATAATAAATACACTAGCACATCATTTCTTAAGCCGGGTACCGGATTGGAGTTGTCTGAGGTGGACCTGAGTAAACATTTAGGAACAGCTGATGGTATGTGTTTAAATGAAACATCCAAGTCTTTTGATGTATCCCGTGTTCCAGAATCAACTTTTGTTCCTGAGACTGTTAATGAAGTAGAGACTATCTCTGGAGCAGTGTCTTATGGCAATCTTGCTGGTCCTGGGGATGTCTCGGTGAATAACGAGTCGCCATCATTCACTTTCAGTGTTTGTAAGCGCTTAGCCAAGCGAGCACTAGAGGATGCTTTGTTCGGAAGTACCAAAATACCAGAATCTTCTCAAAAAGAGATTGGGCAAGATTTAATTGATGAAAATATGGAAACTACACCTGTGTATAACGTGATGGACGAATGCAGTCGAGTGGATTTCAAAATGAAGTCCAATTTTGTTGAACCCCCCTTTCCATCAATGGGGACTGATGTTATACATAAGCTGTGGAGAGAACTTCGTGAATGTCGAACAGATTTAAGACAGCATGCTGCCACTGAACAACCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGTGGTATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTCGGTAACTACCAACAAAAAGATTGTGATATTTTGGAAGCTCCAACTTCACTTTTTAATGAAGGCACATTTAATTGGTATGATGAGCAAATGATGGCGTCCACTGTTGCTGAACATGGGTTTTGTTTTTACGCTAAGCACTTGTCAGATACGGGATTGAAGTCAGGCTGGGAGAACTGTGTAGATTTAACTTCGGAGATGTTGGCTTCCATTATTAACAAAATTGCCCTGGGCTATTTATCTGGACACGGCCTCGCAAACCGTACTAACCCCTGTACTGGAAAGGACTTAGAGAACGGGTCAAGAAATGATTTGCCCGACAGCCAAATGCAGACATCACTGTTCAATGTAGTCCGGTCCACGGTACCTGCAAGCTTATCCTTAGCACTGAAAGGCGTTGCATTCGTTGAATATCTATCTTCATTGCGCCTCATTGCAGGGTCAGAAGATTTCCGCATATCCCAAGGTGCTGAACGGACTAGAAGGCTAAGGGTGCGGGGTGCTCAAGCTCAACATTACTGGAGCGAGGGTACTATGCCGTTGTCGCGTGAAGATATATCATTGTTGTGTGAAGGAGATCTGTACAGAAAGATTTTTTCCAAGTATATTGATGCCAGCAACAAGGTGGATGGCAACTTTACGCAATTCAACACTTGGGCATAG 3810 0.4291 MVQSTLFPQKTQQSDDRADDQQVEEEAHCCANENRKGKSKLKVTPRTKNSKQREKQLQITMPENMGTPKRRNVRRKLIQSTLSPQKTQESDSRDSLFDGQQQKEETHCCVNENEKGNSNRKVTPRSKNSKQKERQLQDTTPKKRSPKGVNGASSQQMLTNVAQINMTVPDLRLEAKLSAEVGKTPQDAAESNRSLCAARRKDEEVLACAAIHVFENNKDVNDTSLPDWKNWTFLGQTAKANCDPESSFSSVFEGSSEPLNIDKLISTFHSSGVIVSQNALSCSDQHSIESEHPQLENSAAPAGRQTSLQSPEAKLDIKANTAQAGICRKSDLEPPSRFLQESMRSYYHSGGYKAEGTSWTYKYKPTKAFEVCGNDESVKFLRDWLQLWHGRRYQSRKDALYMDKGDMQDDDDDDDDYDCSHSDYDSEDMTEEDSLENVLLITGPTGSGKSAAVYACAQEEGFEVLELNTSDYRNGTTVRQHFGDALGSLGFKRLLEHTNSSPMKKKRKLSSGQALPSNKASDELNGEVTGPIVISDDEAVCPDATSWMLPGQRNLIGYDKAQKLILVEDVDILFPEDRGCIAAIQQIAETAKGPIILTCNSNNPALPNNLKRLHVSFSLPSTKELLSHLYMVCVTEGVNIHPLMLEKFIQSCDGDIRKTMMHLQFWFQDRKAQQLYGSLPFDLDVGHQILPKMMPWDFPSQLSELIESEVNKVITTMEGNSSLQGLVEEQLDINEKQSDSDVQQMGTDYIEAKKEEMLERNGSVTDYSKLEAQFHALSEISNSSYAPVVPCNRKIQRKLVVMSSGSEDEDLNNGHPLDMCDDANNGPSLEDNSDSPSKFPMNNKYTSTSFLKPGTGLELSEVDLSKHLGTADGMCLNETSKSFDVSRVPESTFVPETVNEVETISGAVSYGNLAGPGDVSVNNESPSFTFSVCKRLAKRALEDALFGSTKIPESSQKEIGQDLIDENMETTPVYNVMDECSRVDFKMKSNFVEPPFPSMGTDVIHKLWRELRECRTDLRQHAATEQPGAFQVVKLACGMSNLISEADLLFGNYQQKDCDILEAPTSLFNEGTFNWYDEQMMASTVAEHGFCFYAKHLSDTGLKSGWENCVDLTSEMLASIINKIALGYLSGHGLANRTNPCTGKDLENGSRNDLPDSQMQTSLFNVVRSTVPASLSLALKGVAFVEYLSSLRLIAGSEDFRISQGAERTRRLRVRGAQAQHYWSEGTMPLSREDISLLCEGDLYRKIFSKYIDASNKVDGNFTQFNTWA 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0314 1269 MobiDBLite consensus disorder prediction 405 433 - -
Lele01g0314 1269 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 622 678 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 91 111 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 13 40 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 1 155 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 404 433 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 285 310 - -
Lele01g0314 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 671 IPR027417 -
Lele01g0314 1269 Gene3D - 357 618 IPR027417 -
Lele01g0314 1269 CDD AAA 439 500 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 118 141 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 505 522 - -
Lele01g0314 1269 Gene3D - 620 677 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 499 522 - -
Lele01g0314 1269 MobiDBLite consensus disorder prediction 806 839 - -
Lele01g0314 1269 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 63 1247 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0314 Lele-ChrLele01 1794475 1803740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0314 359 665 Core DNA Replication Machinery Family AT5G22010 20.952 8.54e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0314 01 1794475 1803740 Lele01g0314 01 1794475 1803740 ECH
Lele01g0314 01 1794475 1803740 Lele03g0322 03 1788671 1798500 hybridization
Lele01g0314 01 1794475 1803740 Lele04g0317 04 1846977 1856095 hybridization