Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0305 ATGGCGGTTGAATCGGAGGTGGTGGTGGTTGGCCGGCGAGAGGAAGAGCATTTTCACGTGCTGGCGGTGGATGACAGTGTCATCGACAGGAAGCTTTTAGAGAGGCTGCTTACAGTTTCTTCATGCAAAGTGACGTGCGTGGACTCGGGGGATAAAGCTTTGAAGTACCTGGGTCTGCTAGATGACCTTCACAATATTAAAGCTTCCTCCTCCCCCCATTCGCCTCATCAATCGCCCCAGAGTGAGGGTACAAAAGTGAATATGATCATGACTGATTACTGCATGCCTGACATGAGTGGTTATGATTTGCTTAAACGACTCAAGGGATCTCCCTGGAAAGATATACCAGTCGTCATTATGTCATCAGAAAATGTGCCTTCAAGAATCAGCATGTGCCGGGAAGGAGGGGCAGAGGAGTTTCTATTGAAGCCGCTTCAGTTATCAGATTTGAAGAAGCTTCAGCCCTACCCGCTTCCTGAAATTCCCCGACAAATCCATATCTACCGACAAGGATAA 516 0.4826 MAVESEVVVVGRREEEHFHVLAVDDSVIDRKLLERLLTVSSCKVTCVDSGDKALKYLGLLDDLHNIKASSSPHSPHQSPQSEGTKVNMIMTDYCMPDMSGYDLLKRLKGSPWKDIPVVIMSSENVPSRISMCREGGAEEFLLKPLQLSDLKKLQPYPLPEIPRQIHIYRQG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0305 171 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 155 IPR045279 GO:0009736
Lele01g0305 171 Gene3D - 19 157 - -
Lele01g0305 171 Pfam Response regulator receiver domain 20 152 IPR001789 GO:0000160
Lele01g0305 171 SUPERFAMILY CheY-like 18 152 IPR011006 -
Lele01g0305 171 ProSiteProfiles Response regulatory domain profile. 19 158 IPR001789 GO:0000160
Lele01g0305 171 SMART REC_2 18 154 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0305 Lele-ChrLele01 1737205 1738925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0305 10 156 Response Regulator Gene Family AT3G57040 58.389 1.92e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele01g0305 Response_reg 4.2e-17 CL0304