Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0298 ATGAGGATGAAGATGGAGATGCAGACTTATCCGAGAGCCAAGAATTCGAATTTGGAGAGCTCGAGTTTCTTGAGGGCCAAGGAAGCAATGGAAGAAGATGAGATTGATCCGGATGAACTGTCGTACGAAGAGTTGATTGGGTTGGCGGAGTTCATAGGAGAAGAGAGAAGAGGATTGTCAGCGAACGAAATCCCTTCCTGCCTTCATCCTTACACTTGCCATATTGATGAAAACAAGACAGGCATTGATCGCTGCGTTATATGTCAGATTGAATACGAAGAAGGTGAAGCCCTCATGGCGCTTCATTGTGAGCACCCTTATCATTCAGATTGCATCTCCAAGTGGCTTCAGATTAAGAAGGGGAAAGCTTCACGTCCAGACATTGAGATGGCTGATGATTTGATGTCCATGTGCGTTGAATTCTTGCGAGCAACTAGTTGCGGCAAGGCTCTGTACGGAGAAAAGGAGTGGTACTTCTTCTCGCCCAGGAACCGCAAGTATCCCAACGGTTCCAGACCAAACCGTGCGGCCGGAACTGGCTACTGGAAGGCCACCGGTGCCGATAAACCCATCGGGTATCCCAAGCCCGTGGGGATTAAGAAGGCTCTGGTTTTCTACGCCGGGAAAGCGCCTAAAGGAGAGAAAACCAATTGGATTATGCACGAGTATCGTCTGGCCGACGTGGATCGCTCTGCTCGCACAAACAACACCTTGAAGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATCATTGAGAAACCACCGCCTGTTGACGGCCGCAAAACTGAATGGTCAGAAATGGAGGACAAGAAGCCGGAAATTGTGTCTCGTGGTGTTGGTATTCCCCGGCATCCTCGTCATGCTCCGGCGGTGGGGGCGGCTGCCATGACCGATTACTCGTACTTTGACAAGTCGGATTCAGTCCCGAAGCTGCACACGGAGTCGAGCTGCTCCGAGCATGTGGTATCGCTGGAGTTCGCGAGCGAGGTGCAGAGCGAACACAGGCGGAATAAATGGGAAAAGAACGTTGAGTTTGCATATAATTACGCGGGTGCCACCATGAACAATGGTTTCGAGTCTGAGAGTCAGTTGATGCAGAGCAATAATCAGGTGCCGTCGTTGCAGGACATATTCATGTACTTTCAGATGCCCCCATTCTGA 1173 0.5038 MRMKMEMQTYPRAKNSNLESSSFLRAKEAMEEDEIDPDELSYEELIGLAEFIGEERRGLSANEIPSCLHPYTCHIDENKTGIDRCVICQIEYEEGEALMALHCEHPYHSDCISKWLQIKKGKASRPDIEMADDLMSMCVEFLRATSCGKALYGEKEWYFFSPRNRKYPNGSRPNRAAGTGYWKATGADKPIGYPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARTNNTLKLDDWVLCRIYNKKGIIEKPPPVDGRKTEWSEMEDKKPEIVSRGVGIPRHPRHAPAVGAAAMTDYSYFDKSDSVPKLHTESSCSEHVVSLEFASEVQSEHRRNKWEKNVEFAYNYAGATMNNGFESESQLMQSNNQVPSLQDIFMYFQMPPF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0298 390 PANTHER NAC TRANSCRIPTION FACTOR 56 105 304 - -
Lele01g0298 390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 122 IPR013083 -
Lele01g0298 390 ProSiteProfiles NAC domain profile. 98 251 IPR003441 GO:0003677|GO:0006355
Lele01g0298 390 SUPERFAMILY NAC domain 148 251 IPR036093 GO:0003677|GO:0006355
Lele01g0298 390 SUPERFAMILY RING/U-box 84 120 - -
Lele01g0298 390 Pfam Ring finger domain 84 119 IPR001841 -
Lele01g0298 390 Pfam No apical meristem (NAM) protein 148 225 IPR003441 GO:0003677|GO:0006355
Lele01g0298 390 Gene3D NAC domain 123 254 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0298 Lele-ChrLele01 1697419 1701563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0298 148 388 NAC Transcription Factor Family AT1G01720 60.474 1.44e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele01g0298 NAM 2.8e-18 No_clan