Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0283 ATGGGGAGAGGTAAGATTGAGATCAAGAGAATTGAGAACTCAAGCAACAGGCAAGTGACCTACTCCAAGAGGAAGAATGGGATCCTGAAGAAGGCGAAGGAAATTACTGTTCTATGCGATGCCCAAGTTTCCCTTATTATCTTTGCTGCATCTGGAAAGATGCATGAATACATCAGCCCTTCAACAACGTTGATTAACGTCCTGGAAAGATATCACAAAACGTCTGGGAAGAGGCTGTGGGACGGCAAGCATGAGGACTTAAACAACGAAATTGATAGACTCAAGAAAGAGAACGACAGCATGCAGATTGAACTCAGGCACTTGAAGGGAGAGGATGTGAACACGCTTAATTATAAGGAGCTTATGGCCTTAGAGGATGCCTTGGAATGTGGCCTCGCCGGAATACGAGAGAGACAGATGGAGATTTACAGGGCACACAGAAGAAATGGCAAGATGTTGGAGGAAGAGAACAGGGAGCTTAATTTTATACTGCAACAACGTTTGGCAGTGGAAGGAGCGAGAGAATTGGAGAATGGATTTGACGAGACCATGAGGGAGTTCCATTCCCAGATGCCATTCTCCTTCCGAGTGCAGCCGATGCAGCCAAATCTTCACGAGAGGACGTGA 627 0.4625 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHEYISPSTTLINVLERYHKTSGKRLWDGKHEDLNNEIDRLKKENDSMQIELRHLKGEDVNTLNYKELMALEDALECGLAGIRERQMEIYRAHRRNGKMLEEENRELNFILQQRLAVEGARELENGFDETMREFHSQMPFSFRVQPMQPNLHERT 208
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0283 208 ProSiteProfiles K-box domain profile. 84 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele01g0283 208 Coils Coil 77 111 - -
Lele01g0283 208 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 Pfam K-box region 83 162 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele01g0283 208 SUPERFAMILY SRF-like 2 96 IPR036879 GO:0003677|GO:0046983
Lele01g0283 208 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 203 - -
Lele01g0283 208 Gene3D - 13 103 IPR036879 GO:0003677|GO:0046983
Lele01g0283 208 CDD MADS_MEF2_like 2 80 IPR033896 GO:0000977|GO:0045944
Lele01g0283 208 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Lele01g0283 208 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele01g0283 Lele-ChrLele01 1594330 1596709 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0283 1 143 MADS-box Gene Family AT5G20240 66.434 8.24e-67 200
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Lele01g0283 K-box 2.1e-18 No_clan