Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0282 ATGCATATATATCTTAGCATTGCTGTCGTGGTTGTGCATGTACATGGACTGGACAAATACACACACACACACACACACTTGTGTGTGTGTGTGTTATGCGCCCCTCGAAAGCATTTGCGAATATGCCATGCATGCAATGCATTAATCGGGGTGAACAATGATTATGATGCCACACGCGAGTCTGTTATCATGAAGCATTGTTCAGAGTTTCCATTGCAATCTGTTCCCGTGGGGCTGTCCTGTTCAGAAGTAGGCTGCTCTGTGTTGGACTCTAACATTGAGCTTTCCAATATTCTGGATGGTTGTAAATATTTCTCTACAAATGAAGAATCTGGTTCTGCAAGCTGGATTGATGTAGCCGACATGCCCAGCAATGCTAGAGCAAGTGAATATGAAGATGCTGATATGTTGCTAGTGCAGGAAACCTTGGACAATGATTGTCAGAACTGTTGCAGGACATTTTGTGGGCCATGTGAAGTTTCTAACCTAGAAAATGGTAGCTTAAGCACAGAAGAAAAAACTTACAATCAAGATGACTATCAACTTATATCAGAGTTTAAATCTGTAAATGGTTCGCCAAAGGATATGGAGAGCAATATAATCCCTTCGGCAGGGGACACTTTAGTGGCTGTGGAAGAAAAAAACAATGATTCTGGTTTACTCACTGATACTGGCAATTATATATTTGATTTCATTTATTCTGAATTTTCCTTGGAATCAGAACCTATAACTGGCTGTCTAGTAAATTTTCACACAAAGAGTGAGCAGGAGGACATTCTGAGAAATACAGATCCCTTGGAGGTTGTAGACAACCGCAATACTTTATCTGGGATGGAAGTAACTGCTTGCAAGCAGATATCTCCTGCACAGGGTAGCAACGTGCCTTCTGATGAAACTTCTACCTATCGTACCTTTTCTTCTGAATCAGGTCTCCCCTCCTTTGTTTCTTTAAATGATAATAACCCTTCAAAGGATGTGCCGGATCTCCTACTCAATGAGAATAGCTGTGTTATCAGTTATAATAACAATGCGTGCAATTCTAGACAGAATGATGATGAAGGAAAACAAATTTTCAAAATTGATTGCGTCACTAAAAGCAAACATTCAGACACTGTGTTATTGCCTCATCGAAGGAACAGTCGACAAAACAAATCTGCTTGTAAGCAACAGACTGGAAGGGCTCCAGGAAAATGCAATAAGCAAGTGAATATGCCTCAACAAGAGTTGGGTGTGAAGACAATCTTAAAGTCCACTAGAAAGAAAAGAAGCTGTTTCTCCAGAGCAGCTCGCTCTTCTGAGTGGGGTTTGCTAGGGAATGTTAAACAGGCTATTGGAATGAATAGAGAGTTAAACACAAACAAAGTTATGTTTGAAGGATCGGGGAAGGCTAGGGGCAGCTGTCAAAGTGGAAAAACAAATAAAGATAGTGAAAATTATAGCACATTCAATTCATTGTCCGCTGCTTCAACCACTCATATGCGCCTGAAGATCAAAGTGGGAAAAGAGTTCAGCTTATATTATCCAAACGTCATAGTTCCAGAATCTGTTGATGGCTTGGCTTCTGCTTCCAACTTGGCACCTGGTTCAGGTTCTCAAAATTCAGCTAACAATACTGGAGACAAATTATTCGAAGAGGTGACTCTGGGAATGTTGGAATCTGATAAAAATAACCTTAACAAGTATGCTGTTCAGAATGGGCAAATTGCCAACAACTTGGAAAGTACTGCACTAGTGGAGAAGTCAGATGGCAATGCAGAGGAGCCTTGTCTTGTGGCTCCCTCAAAGAAGTTGGTTGATGCATTGATAGAGCCTGTCTATATTAAGGGTATGGATCCTGGAACTGGAACTTCACCTGATTCAGAAGTGATTGATTCAATTCCTGAAGTCCGGCTGGGAGAAAGGCATCAGGAAGATCTGAATGATACTGATTTTGGTTCTTCTAAAGAGTTTAATTTTTCTGTTCATGATACTGCTAGCAAGAGAAAGAAGAAGAAAGATACACTTACTTGTTCACTTAATAGTAATGTAAGAGATGTATCACCAGATTCCCTGGGCAAAAATAAAGCAAATTATTCAAAGAATCTTGGAGGCAAGAAGAACTTCACTGATGCGGTTAGCTCTGTGGAATTTCCTAGATCCACTGATATAAATACAATAAGCATAAGCAATTCTGTAGGCGATGGAGAAGTTCATACAAAACCATTGCACCTCCATGGAGATATTGGACTTAGAGAACCAACTGATGCTTTGGAAGTCAAAAGTAGCTTGGAGGTTAAGATGCATTGCAGCTTAGATGTTAACAATGAGTATTCAGACTCCCCTGTTTCTGAGAAATTTCTGCCTTCTGAAAGGCATTTGGATTCTAAACTTCCCAAAAGTCTTAAATCTGATAATGTCAGCAAGACCAAGTCTAAAGCTTCTGAGTCAAAGAGCAGGAAAAAGACTGCGTGTAGACATGGGGAGAAACAGGGGAGATCCGTCACCAAGCGTGGTGTTAAAGGAAAAAGTGTCTCTGATAAGGTTATATGTGAAACAGAAGATTACCTACATGAAGAAAATGACATTGAAGAAAAACAGAAGTTGGGTTTCAGTGGAAAAATTTATGCTGATGAGAACAAAGTTCTGGCCAGTGTATATACTCTGGACATGGTACCTGGTGTCGGTTTGGGGGAGCAGCATCCATCACCACGAAATGCATGGGTTTGTTGTGATGATTGCCACAAGTGGCGGCGTATTCCTGCTTCACTTGCAGACCTAATTGAAGAAACACTCTGTGCCTGGACATGTAAGGACAGCGATGATAAAGCTTATGCCGATTGCTCTATCGCACAGGAAAAGTCAAATGCAGAGATCAATGCAGAATTAGGATTATCAGATGCATCTAGTGAAGAAGATAATAATGAAGATCACAAAAACTATAAGAAGCCAGAACATCAACGTCCAGTGTGTTCTCAGGAGTCAACTTTTACTCATATTTCTGCCAATGAGTTTCTGCATCGTAGCCACAAAACTCAGACTATAGATGAGATAATGGTTTGCCATTGCAAACCACCCCCAAAAGGTCAGTTGGGCTGTGGAGATGAATGCCTAAACCGGATGCTTAACATTGAATGTGTTCAAGGGGCCTGCCCATGTGGGGATCTCTGTTCAAATCAGCAGTTCCAGAAACGCAATTATGCCAACCTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTACAGACGATTGAGGGCATATCTGAAGGGCAATTCCTTATTGAATATGTCGGCGAGGTGCTTGATATGCATGCCTACGAGGCACGCCAAAGAGAATATGCTTTGAGGGGTCAGAGACATTTCTACTTCATGACCTTGAATGGCAGCGAGGTTATTGATGCAAGTGCAAAAGGAAACCTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGTACAGAAAAGTGGATGGTGAATGGAGAAATCGGCATTGGACTGTTCGCATTGAGAGATATTAAGCAGGATGAAGAGGTGACATTTGACTACAACTATGTTAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTACATAGGTGGTGATCCGCTCAATGCTGACATCATTGCTCAAGATGATTCAGATGAAGAATTTCCAGAACCGGTGATGCTTACTGAAGGTGGTGATATTGAACACAGGCCAGGTGCTCTCCCAGAGAAGCAGAATTCTCTAAACCCCGCCTCTGCTAGCTCTCAGCTGCACAGCTCGATAGAAGTGGAAAATTCTAAGGGCAATTTATCATCTTCCATTCAAATGAAAGTACTTCCCCAGCAAATGGAGGACGTAACAAGCAAAACTATGCCTGTCTTACAACAAGGATATGCATTAGAACCTGAGCATTCTGACAATACTTTGATTCCGAATATGGAGACTTCTTCCTTTTCATCTGCTAGCAAATCCAAGTATGAAGTAATTGAAGACAGATGTGGTCTTTCAGAACCTCGTCTGCTTGTGAAGGCTTCTCACATAAATGGTTCTGTTAAAAAGGGGAAGGTGTGTGCTAATCCTACAAATAATCTCAAAGTTGGAGTGACCGCCAACAGATTGCAGGTTCCATCCATCAGACATAAAAAAGTAGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTGAGGAGAAGCTTAAGGAGTTGCTAGATCCAGATGGAGGAATTAGCAAAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTCTGCTTCTTACTGTAGCATCAGGTGATAGGAGTAATGAAGCCATTCAAAGCTGCAGCAACCGAGACCTTTCCATGATTCTTGGTGCCCTTTTGGAAACAAGATCAAGAGCTGTGCTGAATGATATAATTAAAAAAAATGGTTTACGCATGCTACACAACATAATGAAGCAGTACAGGAGGGACTTTAAAAAAATTCCTATTTTGCGAAAGCTTCTTAAGGTCTTAGAGCGCCTAGCAGAAAGAAAGATTTTGACATCGGAGCATATTAATGGTGGCCCCCCTTGTCGTGGAATGGAGAGCTTTAGGGAGTCAATCCTGTTCTTAACGGAACATGAAGACAAAGAGGTCCATCAAATTGCTCGAAGCTTTCGAGACAGATGGATGCCTAGATCTTTCAGAAAACGTGGCTTTGTAAACAGGGATGACTGTGGGGTGAAATCTTATAGGAGTTTCAAACACAACAGGTTGAACTATACATGTGAACAGAGTTCGAGACCTACTAAAGCAATAGATTGTGCCCAGCTGCCATTGGTTGAAACAAGTTCAGTCAATGCTGGTGCCCAGGAGGGATGCTCTGCACCATCTCTGAATGGGTGTGAAATCAGCGGGCAAGTGAGACGTAAACGTAAAAGTCGATGGGATCAACCGGCAGAGACAAATTCAGTTGTATCTTCTGAGCACAAGAAAGGAAAAGTTGCCTCTGGGCAGTCAAAGCAAGCTGACGTGATTATTAATGCTGTTGTTGGCCAGAATATTTCTGAAGATGTTCCCCCTGGGTTTTCATGTTTAGTCCAGCGTTTGAGTTTTTCAGATGCCTCACGGAACTCTGGTGATCTTGCTTCGCAACGTCCGGGACATTCTAGTTCCGGACGTCCCTCCGATGCAGTTATAGGTTATCCAAGGGAAAAATTTAATCCTTGCTTGCCTGTCTCATATGGAGTTCCATGGCCTGTTATCCAACAATATGGAACACCTCACGTGGAAAACGAAGGCAGTTGGGTCACTGCACCAGGCATGCCTTTCTATCCGTTTCCTCCTCTGCCCCCACATGGACCCCAGAATGCCTGTCAATCTTCTAAGCCTACTGATGCTAAGAAAATAGATCAGCCTGCAGAAATTGTGAAGCGGGATTCTAGTGGTCTAGGTAATTGTTACTCAGATGATATGGCTCCTAGCACAACAGGCCTTTCATGTGAGGATAATAACCACATTTCTAAACCATCGAAGGGTTCCCCTAAAGATTTGGGGAGGAGTTACTTTGGGCAACAAAAATGGAATAAATCAAGAATACCTCGGCCATGGTCCAGGAGGAAATTCTGGGGATATAATGAGAGCAACTCTAGGGGTGGTATGGGCAGTGTAGGTGTAGTAGATGTACCAGAGGATGCAATTTGTACAGCAGTAGAGGCAGATGACAGTCTAATGGAGACTCCAAACATCCATTTCAATTTTCTAGCTGCCTTCAAATTCAATTTTCAAGGATTGAACTGGGTTTTTGTCTGGTGCAGGCAATGCATTTCTTTCATATCTGCAGCTGCTTATCAGGAATGCTTTTTGACTGACTTTGGTATCAGTCTGTTTTGGTTTTGGAAGGACCACACTGAAACTGAGAAAAGCAGTGCCTGGACATATTGA 5892 0.4214 MHIYLSIAVVVVHVHGLDKYTHTHTHLCVCVLCAPRKHLRICHACNALIGVNNDYDATRESVIMKHCSEFPLQSVPVGLSCSEVGCSVLDSNIELSNILDGCKYFSTNEESGSASWIDVADMPSNARASEYEDADMLLVQETLDNDCQNCCRTFCGPCEVSNLENGSLSTEEKTYNQDDYQLISEFKSVNGSPKDMESNIIPSAGDTLVAVEEKNNDSGLLTDTGNYIFDFIYSEFSLESEPITGCLVNFHTKSEQEDILRNTDPLEVVDNRNTLSGMEVTACKQISPAQGSNVPSDETSTYRTFSSESGLPSFVSLNDNNPSKDVPDLLLNENSCVISYNNNACNSRQNDDEGKQIFKIDCVTKSKHSDTVLLPHRRNSRQNKSACKQQTGRAPGKCNKQVNMPQQELGVKTILKSTRKKRSCFSRAARSSEWGLLGNVKQAIGMNRELNTNKVMFEGSGKARGSCQSGKTNKDSENYSTFNSLSAASTTHMRLKIKVGKEFSLYYPNVIVPESVDGLASASNLAPGSGSQNSANNTGDKLFEEVTLGMLESDKNNLNKYAVQNGQIANNLESTALVEKSDGNAEEPCLVAPSKKLVDALIEPVYIKGMDPGTGTSPDSEVIDSIPEVRLGERHQEDLNDTDFGSSKEFNFSVHDTASKRKKKKDTLTCSLNSNVRDVSPDSLGKNKANYSKNLGGKKNFTDAVSSVEFPRSTDINTISISNSVGDGEVHTKPLHLHGDIGLREPTDALEVKSSLEVKMHCSLDVNNEYSDSPVSEKFLPSERHLDSKLPKSLKSDNVSKTKSKASESKSRKKTACRHGEKQGRSVTKRGVKGKSVSDKVICETEDYLHEENDIEEKQKLGFSGKIYADENKVLASVYTLDMVPGVGLGEQHPSPRNAWVCCDDCHKWRRIPASLADLIEETLCAWTCKDSDDKAYADCSIAQEKSNAEINAELGLSDASSEEDNNEDHKNYKKPEHQRPVCSQESTFTHISANEFLHRSHKTQTIDEIMVCHCKPPPKGQLGCGDECLNRMLNIECVQGACPCGDLCSNQQFQKRNYANLKWFKCGKKGYGLQTIEGISEGQFLIEYVGEVLDMHAYEARQREYALRGQRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEIGIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGDPLNADIIAQDDSDEEFPEPVMLTEGGDIEHRPGALPEKQNSLNPASASSQLHSSIEVENSKGNLSSSIQMKVLPQQMEDVTSKTMPVLQQGYALEPEHSDNTLIPNMETSSFSSASKSKYEVIEDRCGLSEPRLLVKASHINGSVKKGKVCANPTNNLKVGVTANRLQVPSIRHKKVVEGSSNGRFEAVEEKLKELLDPDGGISKSKDATKGYLKLLLLTVASGDRSNEAIQSCSNRDLSMILGALLETRSRAVLNDIIKKNGLRMLHNIMKQYRRDFKKIPILRKLLKVLERLAERKILTSEHINGGPPCRGMESFRESILFLTEHEDKEVHQIARSFRDRWMPRSFRKRGFVNRDDCGVKSYRSFKHNRLNYTCEQSSRPTKAIDCAQLPLVETSSVNAGAQEGCSAPSLNGCEISGQVRRKRKSRWDQPAETNSVVSSEHKKGKVASGQSKQADVIINAVVGQNISEDVPPGFSCLVQRLSFSDASRNSGDLASQRPGHSSSGRPSDAVIGYPREKFNPCLPVSYGVPWPVIQQYGTPHVENEGSWVTAPGMPFYPFPPLPPHGPQNACQSSKPTDAKKIDQPAEIVKRDSSGLGNCYSDDMAPSTTGLSCEDNNHISKPSKGSPKDLGRSYFGQQKWNKSRIPRPWSRRKFWGYNESNSRGGMGSVGVVDVPEDAICTAVEADDSLMETPNIHFNFLAAFKFNFQGLNWVFVWCRQCISFISAAAYQECFLTDFGISLFWFWKDHTETEKSSAWTY 1963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0282 1963 Pfam SET domain 1071 1177 IPR001214 GO:0005515
Lele01g0282 1963 MobiDBLite consensus disorder prediction 963 981 - -
Lele01g0282 1963 CDD SET_SETD2 1059 1201 IPR044437 GO:0010452|GO:0046975
Lele01g0282 1963 PANTHER SET DOMAIN PROTEINS 407 1638 - -
Lele01g0282 1963 Gene3D - 890 951 - -
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1692 1714 - -
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1232 1251 - -
Lele01g0282 1963 Gene3D SET domain 952 1217 IPR046341 -
Lele01g0282 1963 SUPERFAMILY SET domain 988 1198 IPR046341 -
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1623 1655 - -
Lele01g0282 1963 MobiDBLite consensus disorder prediction 781 833 - -
Lele01g0282 1963 Pfam CW-type Zinc Finger 900 946 IPR011124 GO:0008270
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1770 1836 - -
Lele01g0282 1963 ProSiteProfiles AWS domain profile. 1008 1058 IPR006560 GO:0005634|GO:0018024
Lele01g0282 1963 SMART set_7 1060 1183 IPR001214 GO:0005515
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1692 1708 - -
Lele01g0282 1963 MobiDBLite consensus disorder prediction 1804 1824 - -
Lele01g0282 1963 SMART PostSET_3 1185 1201 IPR003616 -
Lele01g0282 1963 FunFam Histone-lysine N-methyltransferase 958 1215 - -
Lele01g0282 1963 ProSiteProfiles Post-SET domain profile. 1185 1201 IPR003616 -
Lele01g0282 1963 ProSiteProfiles Zinc finger CW-type profile. 894 948 IPR011124 GO:0008270
Lele01g0282 1963 SMART shorttest3 1008 1059 IPR006560 GO:0005634|GO:0018024
Lele01g0282 1963 MobiDBLite consensus disorder prediction 957 982 - -
Lele01g0282 1963 Pfam AWS domain 1022 1057 IPR006560 GO:0005634|GO:0018024
Lele01g0282 1963 ProSiteProfiles SET domain profile. 1060 1177 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0282 Lele-ChrLele01 1578608 1594098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0282 1043 1200 C2H2 Transcription Factor Family AT2G23740 33.143 3.29e-19 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele01g0282 SET 9.7e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0282 01 1578608 1594098 Lele01g0282 01 1578608 1594098 ECH
Lele01g0282 01 1578608 1594098 Lele03g0285 03 1569004 1586953 hybridization
Lele01g0282 01 1578608 1594098 Lele04g0273 04 1611758 1613000 hybridization