Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0280 ATGGGAGAGGCCGGAGAAGTACACGGCGGAAGCTCCGGTGGCCGGACGTTGGTGGTGGGAATGAAGTTAGACTCGGCCAGCAAGGAGCTGCTCACTTGGGCTCTGGTCAAAGTCGCTAAGCCCGGTGATGTTGTGGTTGCTCTTAATGTTCTTGGCAACAATCAAATCGTCGATCGAGATGGGAAATTGTCCCTTCTTTCGCTTGTCAACGCATTCGACTCTGTTCTTGCTGTTTATGAAGGTTTCTGCAATTTAAAACAGGTTCGCCTCTGTGTGGATCTCAAGCTCAAAGTCTGCAGAGGACCATCAGTACGGAAAATTTTAGTCCGAGAAGCAAATTCTTATTCTGCAACTCACCTTATAGTAGGAACAGCACATGGCCTCCATCCAATTCGGCTATCTTCCTCCGTAGCTAAGTATTGTGCCAAAAAGTTATCCAGAAACTGCTGAATTGATCGTCAGAACAAAATTGGTTTGCTTGGAACTATTCACCGTACATTCAATAAGAGTTCTAAAGTACTAAATGACGACAATACAGAAAATAAGCATGGCAAAGTTTTTCTGGGGTCTGAAGCATCTGTGATTCTGAAACCAAGCTGCTCAATATGTGGCTCAATTTCAGGAATGCCAAACATGTCCTGCCAACATTCTGCAGAGAAGACTTCAGGTGACGGTGGTACTAACGAAAATGCTTTGGCTATAGTGCCTGTACAGACAACTGAGGCAGCATCAAGTACAGCAACCACCTTGTCCGACAGAGAACCACCTGAGCTGAAACATGGTTGGCCACTGTTACAACAGATCGTTTTATCAGATAGAGAGTCCCATGATCTATCATCGATGCGCCAGATATCTGTTGTCCAGTGGGCAATGCGGTTGCCTTGTAGAAATCTTTCATATGACACAAAAGTTCATGATCATAAGAAAACTGTAGCTTTAGATGGCAGAAGCGGTGCTATTGTTCCGGTTGATGTTGTAATAAGGACTGATTCTTCTTCATCAGACAGCAATTCAAAGAGCATTCCTAAAGAATTGGAGGATCTTCACGAGAAATACTCATCCTCCTGCAGATTGTTTCAGTACAATGAACTTGCACTGGCAACTTCAAATTTCTCGCGAGAAAATTTGATTGGAAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGATGGCAAGGAGCTTGCCGTTAAGATTTTAAAGCCTTCTGATGACGTTTTGAAAGAGTTTCTATTGGAAATAGAAATTGTCACTACCTTGCACCATAAAAACATTATTTCCCTCCTGGGTTTCTGCTTTGAGGATGGCAATCTTCTTTTGGTCTATGATTTTTTGTATAGGGGAAGTCTTGAAGACAATCTTTATGATGTAAAATCATCAAATGTATTATTATCTGAGGATTTCGGGGCCCAGCTCTCTGATTTTGGTCTTGCTAAATGGGCGTCCACCTCATCTTCACATATAACCTGCACAGTCGTTGCTGGAACTTTCGGTTACTGGGCTCCAGAGTACTTCATGCATGGCAAAGTCAATGCCAAGATTGATGTCTACGCATTTGGTGTCGTACTCCTGGAACTCCTTTCTGGAAGAAAACCCATAGGTGGAGATTACCCGAAAGGCCAAGAGAGCCTCGTTATGTGGGCAAGTCCAATTCTTAATAATGGGAAGGTGTCACAATTGTTAGATCCAAGTTTGAGCGATAAGTGTGATCATGAACAGATACAGAGGATGGCTTTGGCAGCCAAACTTTGTATAAGACGTGATCCAAGAGCCAGGCCCCCTATGAGCCTTATTTCAAAGCTTCTTCAAGGGGATGTTGACATGATCAAGTGGGCAAGGTTAGAAGTTAACGCTTCAGATAAACCAGGAATGCTTGACGATGAACCATGCCCACCTTCAAATTTACAGTCACATCTTAATGTTGCGCTGCTTGATGTGGAGGATGAATCAACGTCCATGAGCAGTGTTGAGCAGAACGTGTCATTGGAAGACTACTTGAGAGGGCGATGGAGCCGTTCATCCAGCTTTGACTGA 2037 0.4379 MGEAGEVHGGSSGGRTLVVGMKLDSASKELLTWALVKVAKPGDVVVALNVLGNNQIVDRDGKLSLLSLVNAFDSVLAVYEGFCNLKQVRLCVDLKLKVCRGPSVRKILVREANSYSATHLIVGTAHGLHPIRLSSSVAKYCAKKLSRNCXIDRQNKIGLLGTIHRTFNKSSKVLNDDNTENKHGKVFLGSEASVILKPSCSICGSISGMPNMSCQHSAEKTSGDGGTNENALAIVPVQTTEAASSTATTLSDREPPELKHGWPLLQQIVLSDRESHDLSSMRQISVVQWAMRLPCRNLSYDTKVHDHKKTVALDGRSGAIVPVDVVIRTDSSSSDSNSKSIPKELEDLHEKYSSSCRLFQYNELALATSNFSRENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIVTTLHHKNIISLLGFCFEDGNLLLVYDFLYRGSLEDNLYDVKSSNVLLSEDFGAQLSDFGLAKWASTSSSHITCTVVAGTFGYWAPEYFMHGKVNAKIDVYAFGVVLLELLSGRKPIGGDYPKGQESLVMWASPILNNGKVSQLLDPSLSDKCDHEQIQRMALAAKLCIRRDPRARPPMSLISKLLQGDVDMIKWARLEVNASDKPGMLDDEPCPPSNLQSHLNVALLDVEDESTSMSSVEQNVSLEDYLRGRWSRSSSFD 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0280 678 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 14 153 - -
Lele01g0280 678 SMART serkin_6 371 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0280 678 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 340 445 - -
Lele01g0280 678 Pfam Protein kinase domain 457 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0280 678 Pfam Protein kinase domain 372 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0280 678 SUPERFAMILY Protein kinase-like (PK-like) 352 607 IPR011009 -
Lele01g0280 678 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Lele01g0280 678 Gene3D Transferase(Phosphotransferase) domain 1 450 611 - -
Lele01g0280 678 CDD USP_Like 16 144 - -
Lele01g0280 678 Gene3D Phosphorylase Kinase; domain 1 331 445 - -
Lele01g0280 678 ProSiteProfiles Protein kinase domain profile. 371 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0280 678 PANTHER OS08G0249100 PROTEIN 457 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0280 Lele-ChrLele01 1573324 1576382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0280 359 609 Trihelix Transcription Factor Family AT1G70460 37.884 9.24e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele01g0280 Pkinase 1.8e-16 CL0016