Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0268 ATGGCATCGTCATCGAATTCACCATGTGCGGCTTGCAAGTTTCTGCGGCGAAAGTGCCAACCGGAGTGCGTGTTTGCACCCTACTTCCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAGAGTATTTGGAGCGAGCAATGTCACCAAGCTCCTGAACGAGTTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTGGCCTACGAGGCCGACATGCGCCTCCGTGACCCCGTGTACGGCTGTGTAGGAGTGATCTCTCTCCTGCAACACCAACTCCGGCAGCTGCAAATGGATCTCACCTGTGCCAAGTCGGAGCTCTCCAGGTACCAGACCTTGGGCATCGCCGGCCACAGCCTCATCGCGGCTCACCACCAGGCCCAAAACATGGGCATGAACCTGATCGGCGACCACCACCACCACCACCAGTTCTTCCCTCGGGACCACCATCAGGCTTCCATGATCAGGAACTTTGATGCGGGTAACAACTACGACGCTGGTCTCCTTTCCATGAACGTCTCCGCAAGTATAGGGCAGCTCAATCAGTTTCAGCATCAGCATCCTAGAGCTGCCGCCGGCGACGATCGTCGGACTATTGATCCCTCTTAG 612 0.5654 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHRVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGIAGHSLIAAHHQAQNMGMNLIGDHHHHHQFFPRDHHQASMIRNFDAGNNYDAGLLSMNVSASIGQLNQFQHQHPRAAAGDDRRTIDPS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0268 203 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lele01g0268 203 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Lele01g0268 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 144 - -
Lele01g0268 203 Coils Coil 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0268 Lele-ChrLele01 1515622 1516233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0268 2 203 AS2 family AT1G65620 71.028 3.60e-94 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele01g0268 LOB 2.7e-43 No_clan